Query= MSMg01no105_g24.b1 MSMg01no105_g24.b1 CHROMAT_FILE:
MSMg01no105_g24.b1 PHD_FILE: MSMg01no105_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:04 2005
(349 letters)
>mm_chr5_75379469_75380218
Length = 750
Score = 646 bits (334), Expect = 0.0
Identities = 346/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 gcagggtttggggcctattatttgtggagtaagcaaattgagcaggatatgatcgaagat 60
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 550 gcagggtttggggcctattatttatggagtaagcaaattgagcaggatttgatcgaagat 491
Query: 61 aaaaactaccatgctattgtgtctcccaaggggccttggtaagacatggttgcattgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaaaactaccatgctattgtgtctcccaaggggccttggtaagacatggttgcattgaat 431
Query: 121 ggtggcttagttatggtggatctaattcaacatgcttattccaaaccacaaggcggcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggtggcttagttatggtggatctaattcaacatgcttattccaaaccacaaggcggcacc 371
Query: 181 tcagggaggctgaacggaatggctgttgaggcagcagcctatggagacaagaagatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcagggaggctgaacggaatggctgttgaggcagcagcctatggagacaagaagatggct 311
Query: 241 tgctgtgctctccctaccctgtgacttg-attactggcatgctttttacactctttattg 299
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 310 tgctgggctctccctaccctgtgacttgtattactggcatgctttttacactctttattg 251
Query: 300 cctctgtttccccaccactccctgctataaagctcaaagtgtgtgtgtgt 349
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cctctgtttccccaccactccctgctataaagctcaaagtgtgtgtgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 750
Length adjustment: 9
Effective length of query: 340
Effective length of database: 741
Effective search space: 251940
Effective search space used: 251940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_g24.g1 MSMg01no105_g24.g1 CHROMAT_FILE:
MSMg01no105_g24.g1 PHD_FILE: MSMg01no105_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:04 2005
(455 letters)
>mm_chr5_75283206_75284060
Length = 855
Score = 818 bits (423), Expect = 0.0
Identities = 447/455 (98%)
Strand = Plus / Plus
Query: 1 aagttctcaaagaatgtttctgtgtgtactcttcttcaaggggcgccttgccaaaccagg 60
|||||||||||||||||| || ||||||||||||| ||||||| | |||| |||||||||
Sbjct: 201 aagttctcaaagaatgttcctctgtgtactcttctccaaggggtgtcttggcaaaccagg 260
Query: 61 aaagtaaatcaagagaggggcacatttgaacagaaggagaaatgccaagaagaggtaagg 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtaaatcaagagaggggtacatttgaacagaaggagaaatgccaagaagaggtaagg 320
Query: 121 gtacaggggaaatgatgagggagatgccaaagtccagcaaggatgggaccatggggtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacaggggaaatgatgagggagatgccaaagtccagcaaggatgggaccatggggtcag 380
Query: 181 gctcagggctctccacaagccggaaaaaccgagacacccaatgtcaggcaagatacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcagggctctccacaagccggaaaaaccgagacacccaatgtcaggcaagatacagac 440
Query: 241 agacagttagagaaagagtttaagaacatgatagtttccaggcagtggtggcatacaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacagttagagaaagagtttaagaacatgatagtttccaggcagtggtggcatacaccc 500
Query: 301 ttaatcccagcacttgggaggcagatgggtctcagtgaattcaagatgagtctggtctac 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaatcccagcacttgggaggcaggtgggtctcagtgaattcaagatgagtctggtctac 560
Query: 361 aagtaagaaggacaatcaggctacacagagaaaccctgtctcgaaaaaaaacaaaaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtaagaaggacaatcaggctacacagagaaaccctgtctcgaaaaaaaacaaaaagca 620
Query: 421 aaccaaacatgatagtgatgttgggcagtcctgtg 455
|||||||||||||||||||||||||||||||||||
Sbjct: 621 aaccaaacatgatagtgatgttgggcagtcctgtg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
