XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAATCCGCGGAATTCT
ATCATGCTTCCTTTAAGCACAACTCTGTGTGCGTAGGTGTTTGCATATGG
CTATGCATCTACTCTTGTGGGTACCTCGAGAGGCCAGAAAAGAGCCTCAT
ATCCCCTGGACTAGATTTGTGGCTGATAGTATTAAATCTGTCATGGGTGC
TGGAAACTGAACTGGGCTTCTCTGTGAGAACAGTCACACTCTTAACAGTT
GAACCATCTCTCCAGCCCCAACAATTTGGGTTTTTTAAGACACCCCAGGG
GTGATCTTCTCAAGGTGATACTTTTGTTTTAATTTTCATGAAATGGTATG
GTTCTGATCTTATGTGATAGGTCTAGGGTCCCTGTATCCTGTCCTAACAG
GTTTGGGTTTTGGATAAGACTTCCCTGAGGAGAGGGCCACACAGACCTAG
TGGGTCAGCCTTGTCTCGTTAGAGCTATGAGCATTCATTCATTCATTCAT
TCATAGTACCTGGAATGTACTGCTGTGCTTCCCCAAGATGTATCCTTCAC
CTTCAAGCGAGGCCTTTCATTCCTCATCTCATTGTCACAGAAATCAGGAC
ATAAATCATATGCAGGAATGCCCAAGGGTACGCCATCAGCTGTATTGTGG
TTCAGGTGCTGGCTCCAGTTGCTGGTAACAAAGTGTCCCTTAGTTACTCT
CCTCTTTG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTATACAGAGAAACC
CTGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAG
AAAAGAAGAAAGAAAGCAAGCAAGCAAGCAAGCAAGCAAGCTGTCCATTG
AAGTATCATGCAGTCCAGGCTGGCATTGAACTTGTGGATAAAAAGCCTTG
AATTCCCTATCCCCCTGCCTCTACCTTCTGCGTGCTGGGATTCCAGGCAC
GTGCCATCATGCCCAGCATAGGTACTCTTATTATTTCTGTTTTACAGCTG
AGAACATTGAGTCATAAACGTGACAAAGAACTTATCCAAAGTTATGGAAT
TAGACACCAAACCCAGCCTTGCCTTGGCTCTTGAGCCTAGAGCCCTCGGC
TTAATGCTATTGCTCATGACAAAAAGCTAAGAAAGGGACCTGCAGGATGG
CTCAGTGGTTAAAGCTCTTGCCAGGCAATCTTGAGGACTTCAGTTTGGAT
CTCTAGACACAATGCTTGACTGCCAGGTAATCACGGGGCCTGCCTGTAGT
TCCAGCTTTGGGAGACAAGAGTCAGGGGATCCCCAGAGAGTGGCTACCAA
GACTAGACTCTGGGTTTAGTTGAGTCCCCACCTCATTAAATAAGGAAAAG
TGCGGGACGAC

Query= MSMg01no108_e21.b1 MSMg01no108_e21.b1 CHROMAT_FILE:
MSMg01no108_e21.b1 PHD_FILE: MSMg01no108_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:07 2005
         (646 letters)



>mm_chr5_132210109_132211154
          Length = 1046

 Score = 1087 bits (562), Expect = 0.0
 Identities = 616/650 (94%), Gaps = 26/650 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaagcacaactctgtgtgcgtaggtgtttgcatatggctatgcatctactcttgtgggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ttaagcacaactctgtgtgcgtaggtgtttgcatatggctatgcatctactcttgtgggt 767

                                                                       
Query: 61  acctcgagaggccagaaaagagcctcatatcccctggactagatttgtggctgatagtat 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 acctggagaggccagaaaagagcctcatatcccctggactagatttgtggctgatagtat 707

                                                                       
Query: 121 taaatctgtcatgggtgctggaaactgaactgggcttctctgtgagaacagtcacactct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 taaatctgtcatgggtgctggaaactgaactgggcttctctgtgagaacagtcacactct 647

                                                                       
Query: 181 taacagttgaaccatctctccagccccaacaatttgggttttttaagacaccccaggggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 taacagttgaaccatctctccagccccaacaatttgggttttttaagacaccccaggggt 587

                                                                       
Query: 241 gatcttctcaaggtgatacttttgttttaattttcatgaaatggtatggttctgatctta 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 586 gatcttctcaaggtgatacttttgttttaattttcatgaagtggtatggttctgatctta 527

                                                                       
Query: 301 tgtgataggtctagggtccctgtatcctgtcctaacaggtttgggttttggataagactt 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgtgataggtccagggtccctgtatcctgtcctaacaggtttgggttttggataagactt 467

                                                                       
Query: 361 ccctgaggagagggccacacagacctagtgggtcagccttgtctcgttagagctatgag- 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 466 ccctgaggagagggccacacagacctagtgggtcagccttgtctcgttagagctatgagc 407

                                                                       
Query: 420 ---cattcattcattcattcattcatagtacctggaatgtactgctgtgcttccccaaga 476
              ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 406 attcattcattcattcattcattcatagcacctggaatgtactgctatgcttccccaaga 347

                                                                       
Query: 477 tgtatccttcaccttcaagcgaggcctttcattcctcatctcattgtcacagaaatcagg 536
           |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tgtacccttcaccttcaagggaggcctttcattcctcatctcattgtcacagaaatcagg 287

                                                                       
Query: 537 acataaatcatatgcaggaatgcccaagggtacgccatcagctgtattgtggttcaggtg 596
           ||||||||||| |||||||||||||||||||||||||||||||||||||           
Sbjct: 286 acataaatcatctgcaggaatgcccaagggtacgccatcagctgtattg----------- 238

                                                             
Query: 597 ctggctccagttgctggtaacaaagtgtcccttagttactctcctctttg 646
                      |||||||||||||||||||||||||||||||||||||||
Sbjct: 237 -----------tgctggtaacaaagtgtcccttagttactctcctctttg 199


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)