CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGCTGTTTCTCGTGACTACCTGACCATGGAGTACAGAACTTTGGAA
TCAGTTTGTGGGAGGAATTTAGAGAAGTTGGAGATGCAGACTACAGAAAC
CAATGGGTGTTGAAAGTACAGCTTAATGAATGGCACCATGGGAGCTCAGG
CGAGCAGAGCACAAACAGGAAACATGGCAGAAAATGTGATGGTGGTGGGG
AATCAGGAGGGAACACGACTATTTGAAATCAGACGCAAGGTCATAAATGT
TTCATTATGTAACAACTTGTCTGCATTTAGCACACGTGGGGAGACTTTGA
GATAGATTTATGATAAACTAATCTCTCGAGCGCGCCCCCAACTCGCCAGC
AAGAACGACGCTGCTACACGATCCTTCTGCACACGTTTATTCAGTCCTAT
TTCTTCTTGTTTATATCTCCCTTGTTTATATCTCCCTTGTTTATATCTCC
CTCGAACCCTGGGCCTCTCACTCTTTTATACTCTCAGTTCCCATCCATGC
ACAGTAGGTCTCGTCTCCTCACCATGCACGCAGCTTCAGCTAATCATGGC
AGCAGGGGCAAATCTCCACCAAATTGCACTCACCTGTATCCTGGTACACC
TGCGCATCACTCAATACGCTTGTGCCTTATATGAGGAAGTCAGGTTGCAC
CCTTATGACTTATCTGCTGTCCCCGTTTCCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCATGGTAGGGCTACCAATGGCA
AAGAAACTGCAAGCTCTGAAATGGCTGGAAGAAATCACGTGCATTCTGAG
TCTGGCTTTTTCCTAAACCTTGCGAATTCTGTCAACATTAATTCTGTGAA
ATATGGAAGCTCCATTACTTGAGAGAAGTGAGCACTTGTGTTTTCTCTAA
GCCTTGTTTGGATCCCATCTTTCCCATAAGTATCTTACTGGTGAGGAGAA
TGGTCTCTGGTGGGCATGTAGCACAGGAGATGGAAATCAAGAATCAGAGT
ACTGTGCTGTTAATCTGATATGGTGTAGAAAAACGTAATGTAGAGGTTTT
AGCTACTGTAAGTTCTGCAAACCAGTTGTGAATTGAGCTGAGTTGCCTTC
AGCGAATGTGGTGATCTTGCTTCCTGTCATCCTTCAGGATCTATTACTCT
CCCCACCACGTCCCACTGAGTCTTTCAAAAACTTTATTGGAATGTACTGT
TAGAGACAATTTCCTTTACATATATATTACTTAAATACTACACACACACA
CACACACACACACACACACACACACACATATATATATATAAAATTTTGAT
GAGTTTGGACATTGGCACATAACTTGTGTTCTATTACCATGGTTAAGGCA
CCAAATATATCTATCACCTCCCAGTACCCCTTN

Query= MSMg01no112_l12.g1 MSMg01no112_l12.g1 CHROMAT_FILE:
MSMg01no112_l12.g1 PHD_FILE: MSMg01no112_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:57 2005
         (586 letters)



>mm_chr5_45593395_45594380
          Length = 986

 Score = 1075 bits (556), Expect = 0.0
 Identities = 581/594 (97%), Gaps = 8/594 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccatggtagggctaccaatggcaaagaaactgcaagctctgaaatggctggaagaaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tccatggtagggctaccaatggcaaagaaactgcaagctctgaaatggctggaagaaatc 654

                                                                       
Query: 61  acgtgcattctgagtctggctttttcctaaaccttgcgaattctgtcaacattaattctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 acgtgcattctgagtctggctttttcctaaaccttgcgaattctgtcaacattaattctg 594

                                                                       
Query: 121 tgaaatatggaagctccattacttgagagaagtgagcacttgtgttttctctaagccttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgaaatatggaagctccattacttgagagaagtgagcacttgtgttttctctaagccttg 534

                                                                       
Query: 181 tttggatcccatctttcccataagtatcttactggtgaggagaatggtctctggtgggca 240
           |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 533 tttggatcccatctttcccataagtgccttactggtgaggagaatggtctctggtgggca 474

                                                                       
Query: 241 tgtagcacaggagatggaaatcaagaatcagagtactgtgctgttaatctgatatggtgt 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 473 tgtagcacaggagatggaaatcaagaatcaaagtactgtgctgttaatctgatatggtgt 414

                                                                       
Query: 301 agaaaaacgtaatgtagaggttttagctactgtaagttctgcaaaccagttgtgaattga 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 413 agaaaaacgtaatgtagaggttttagctactgtaagttctgtaaaccagttgtgaattga 354

                                                                       
Query: 361 gctgagttgccttcagcgaatgtggtgatcttgcttcctgtcatccttcaggatctatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gctgagttgccttcagcgaatgtggtgatcttgcttcctgtcatccttcaggatctatta 294

                                                                       
Query: 421 ctctccccaccacgtcccactgagtctttcaaaaactttattggaatgtactgttagaga 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 293 ctctccccaccacgtcccactgagtctttcaaaaactttattggaatgtactgttagata 234

                                                                       
Query: 481 caatttcctttacatatatattacttaaatactacacacacacacacacacacacacaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 caatttcctttacatatatattacttaaatactacacacacacacacacacacacacaca 174

                                                                 
Query: 541 cacacacacaca--------tatatatatataaaattttgatgagtttggacat 586
           ||||||||||||        ||||||||||||||||||||||||||||||||||
Sbjct: 173 cacacacacacacacatatatatatatatataaaattttgatgagtttggacat 120


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)