Query= MSMg01no113_i09.b1 MSMg01no113_i09.b1 CHROMAT_FILE:
MSMg01no113_i09.b1 PHD_FILE: MSMg01no113_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:58 2005
(376 letters)
>mm_chr5_92580195_92580970
Length = 776
Score = 677 bits (350), Expect = 0.0
Identities = 368/374 (98%)
Strand = Plus / Plus
Query: 1 tagaaacaagtgtggttttctacagaatgtgtcccaccccccaatacacaccccatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaaacaagtgtggttttctacagaatgtgtcccaccccccaatacacaccccatacct 260
Query: 61 acctggatacatgtacacctacacacatgcacacgtacaaaataaaattattttacatac 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctggacacatgtacacctacacacatgcacacgtacaaaataaaattattttacatac 320
Query: 121 atgcttttgtttctgtgggctcatttacctactgcttatttctattgtgtgatgttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcttttgtttctgtgggctcatttacctactgcttatttctattgtgtgatgttcttt 380
Query: 181 ttatgtcagtacagttaattcttttgagtaactactggagtccatcaaatatgtcacaat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ttatgtcagtacagttaattcttttgagtaactactggggtccatcaaatatgtcacaat 440
Query: 241 gcgtttgatttttcctcatttggtggacatttacccagctttattctgttgcatctagta 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtttgatttttcctcatttggtggacatttacccagctttattctgttgcatctagta 500
Query: 301 ttctgatgtttatttttaacttcaatttgaatttgaatttctgtcaaccattttaaagta 360
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 ttctgatgtttatttttaagttcaatttgaatttgaatttctgtcaattattttaaagta 560
Query: 361 gaaatattctgtct 374
||||||||||||||
Sbjct: 561 gaaatattctgtct 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_i09.g1 MSMg01no113_i09.g1 CHROMAT_FILE:
MSMg01no113_i09.g1 PHD_FILE: MSMg01no113_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:59 2005
(337 letters)
>mm_chr5_92689326_92690062
Length = 737
Score = 511 bits (264), Expect = e-149
Identities = 314/358 (87%), Gaps = 42/358 (11%)
Strand = Plus / Minus
Query: 1 agaaaaccaaccaaagccaagaggatggggtgacctggatagtggagggaggtgggcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agaaaaccaaccaaagccaagaggatggggtgacctggatagtggagggaggtgggcagt 299
Query: 61 ggcatgtttgcccctcagtctgcacagggactgtcttcatgagtccctgttaggactaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggcatgtttgcccctcagtctgcacagggactgtcttcatgagtccctgttaggactaag 239
Query: 121 tgtttgtcaccttagtttctgctccctactctcacgcccctcccctcctcc--------- 171
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 238 tgtttgtcaccttagtttctgctccctacgctcacgcccctcccctcctcctcctcctcc 179
Query: 172 ---------------------------------tcctcctcctcctcctcctctttttcc 198
|||||||||||||||||||||||||||
Sbjct: 178 tcctcctcctcctcctcctcctcctcctcctcttcctcctcctcctcctcctctttttcc 119
Query: 199 tccttctcttcctcctcttcctcctcttcctcctcctctctcctcccctcctgctgacag 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tccttctcttcctcctcttcctcctcttcctcctcctctctcctcccctcctgctgacag 59
Query: 259 ctccctgtcatatgtatctatgtatctattgttttatgtatctattcttttggttttt 316
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ctccctgccatatgtatctatgtatctattgttttatgtatctattcttttggttttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
