MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-115P24
Chromosome	5 (Build37)
Map Location	113,225,554 - 113,225,838
singlet/doublet	singlet
Overlap gene	Myo18b
Upstream gene	A230057G18Rik, Cryba4, Crybb1, Tpst2, Tfip11, 2810002G02Rik, Hps4, EG625424, Asphd2, Sez6l, EG625464
Downstream gene	Adrbk2, Crybb2, LOC100042920, Crybb3, 2900026A02Rik, Gm854, Rutbc2, Aym1, C530024P05Rik, Cmklr1, LOC381707, D5Ertd40e, Sart3, LOC100041786, Iscu
Link	Open Mouse BAC browser

Click to get alignment info.

name	A230057G18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330166 MGI:2444886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs

name	Cryba4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12959 MGI:102716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crybb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12960 MGI:104992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpst2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22022 MGI:1309516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tfip11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54723 MGI:1930075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810002G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70118 MGI:1917368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hps4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192232 MGI:2177742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625424 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625424 MGI:3648511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asphd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72898 MGI:1920148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sez6l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56747 MGI:1935121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625464 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625464 MGI:3648937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins

name	Myo18b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74376 MGI:1921626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins

name	Adrbk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320129 MGI:87941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Crybb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12961 MGI:88519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042920 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042920
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Crybb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12962 MGI:102717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2900026A02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243219 MGI:1920194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm854 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333048 MGI:2685700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rutbc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52850 MGI:107320
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aym1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:503692 MGI:1891321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C530024P05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320916 MGI:2445030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cmklr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14747 MGI:109603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC381707 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D5Ertd40e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231630 MGI:1098550
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sart3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53890 MGI:1858230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041786 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 496 ESTs, 1 Protein

name	Iscu (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66383 MGI:1913633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230057G18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375118 GeneID:330166 MGI:2444886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs product : RIKEN cDNA A230057G18 gene transcript_id : XM_489103.3

name	Cryba4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946671 GeneID:12959 MGI:102716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, beta A4 transcript_id : NM_021351.1

name	Crybb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130494 GeneID:12960 MGI:104992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, beta B1 transcript_id : NM_023695.2

name	Tpst2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981951 GeneID:22022 MGI:1309516
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-tyrosine sulfotransferase 2 transcript_id : NM_009419.2

name	Tfip11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130732 GeneID:54723 MGI:1930075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tuftelin interacting protein 11 transcript_id : NM_018783.4

name	2810002G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249055 GeneID:70118 MGI:1917368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810002G02 gene transcript_id : NM_027323.1

name	Hps4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476086 GeneID:192232 MGI:2177742
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 4 homolog (human) transcript_id : NM_138646.2

name	EG625424 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802475 GeneID:625424 MGI:3648511
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625424 transcript_id : NM_001039228.2

name	Asphd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55926228 GeneID:72898 MGI:1920148
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aspartate beta-hydroxylase domain containing 2 transcript_id : NM_028386.1

name	Sez6l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249081 GeneID:56747 MGI:1935121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seizure related 6 homolog like transcript_id : NM_019982.2

name	EG625464 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375085 GeneID:625464 MGI:3648937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins product : predicted gene, EG625464 transcript_id : XM_894605.2

name	Myo18b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254132 GeneID:74376 MGI:1921626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins product : myosin XVIIIb transcript_id : XM_990203.2

name	Adrbk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711829 GeneID:320129 MGI:87941
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor kinase, beta 2 transcript_id : NM_177078.3

name	Adrbk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711827 GeneID:320129 MGI:87941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor kinase, beta 2 transcript_id : NM_001035531.1

name	Crybb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372366 GeneID:12961 MGI:88519
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, beta B2 transcript_id : NM_007773.2

name	LOC100042920 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254170 GeneID:100042920
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042920 transcript_id : XM_001479469.1

name	Crybb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476046 GeneID:12962 MGI:102717
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, beta B3 transcript_id : NM_021352.2

name	2900026A02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373023 GeneID:243219 MGI:1920194
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900026A02 gene transcript_id : NM_172884.2

name	Gm854 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803583 GeneID:333048 MGI:2685700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 854, (NCBI) transcript_id : NM_001033428.2

name	Rutbc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352699 GeneID:52850 MGI:107320
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and TBC1 domain containing 2 transcript_id : NM_172718.2

name	Aym1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60678283 GeneID:503692 MGI:1891321
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activator of yeast meiotic promoters 1 transcript_id : NM_001012726.1

name	C530024P05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343262 GeneID:320916 MGI:2445030
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C530024P05 gene transcript_id : NM_177292.2

name	Cmklr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71896663 GeneID:14747 MGI:109603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine-like receptor 1 transcript_id : NM_008153.2

name	LOC381707 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254532 GeneID:381707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC381707 transcript_id : XM_001471974.1

name	D5Ertd40e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803114 GeneID:231630 MGI:1098550
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 5, ERATO Doi 40, expressed transcript_id : NM_001010825.2

name	Sart3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394238 GeneID:53890 MGI:1858230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : squamous cell carcinoma antigen recognized by T-cells 3 transcript_id : NM_016926.1

name	LOC100041786 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254565 GeneID:100041786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 496 ESTs, 1 Protein product : similar to 40S ribosomal protein S28 transcript_id : XM_001478306.1

name	Iscu (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803041 GeneID:66383 MGI:1913633
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IscU iron-sulfur cluster scaffold homolog (E. coli) transcript_id : NM_025526.2

name	A230057G18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899261 GeneID:330166 MGI:2444886
definition	codon_start : 1 product : hypothetical protein protein_id : XP_489103.2

name	Cryba4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946672 CCDS:CCDS19536.1 GeneID:12959 MGI:102716
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 function : lens structural protein product : crystallin, beta A4 protein_id : NP_067326.1

name	Crybb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963789 CCDS:CCDS19537.1 GeneID:12960 MGI:104992
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 product : crystallin, beta B1 protein_id : NP_076184.1

name	Tpst2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678421 CCDS:CCDS19538.1 GeneID:22022 MGI:1309516
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008476 - protein-tyrosine sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : protein-tyrosine sulfotransferase 2 protein_id : NP_033445.1

name	Tfip11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10190660 CCDS:CCDS19539.1 GeneID:54723 MGI:1930075
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] [Evidence NAS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence NAS]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence NAS]; GO:0001503 - ossification [Evidence IEA]; GO:0045045 - secretory pathway [Evidence NAS] codon_start : 1 note : tuftelin-interacting protein 33; tuftelin-interacting protein, 39 kD product : tuftelin interacting protein 11 protein_id : NP_061253.2

name	2810002G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249056 GeneID:70118 MGI:1917368
definition	GO_process : GO:0048511 - rhythmic process [Evidence IEA] codon_start : 1 note : SRR1-like product : sensitivity to red light reduced-like protein_id : NP_081599.1

name	Hps4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42476087 CCDS:CCDS19540.1 GeneID:192232 MGI:2177742
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0005764 - lysosome [Evidence ISS]; GO:0042470 - melanosome [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0007599 - hemostasis [Evidence ISS]; GO:0007040 - lysosome organization and biogenesis [Evidence ISS]; GO:0030318 - melanocyte differentiation [Evidence IMP]; GO:0006996 - organelle organization and biogenesis [Evidence IMP]; GO:0048081 - positive regulation of cuticle pigmentation [Evidence ISS]; GO:0048075 - positive regulation of eye pigmentation [Evidence ISS]; GO:0050821 - protein stabilization [Evidence ISS]; GO:0006605 - protein targeting [Evidence ISS] codon_start : 1 exception : mismatches in translation note : light ear product : Hermansky-Pudlak syndrome 4 homolog protein_id : NP_619587.2

name	EG625424 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986623 GeneID:625424 MGI:3648511
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC625424 protein_id : NP_001034317.1

name	Asphd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55926229 CCDS:CCDS19542.1 GeneID:72898 MGI:1920148
definition	GO_component : GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IEA] GO_function : GO:0004597 - peptide-aspartate beta-dioxygenase activity [Evidence IEA] GO_process : GO:0018193 - peptidyl-amino acid modification [Evidence IEA] codon_start : 1 product : aspartate beta-hydroxylase domain containing 2 protein_id : NP_082662.1

name	Sez6l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249082 GeneID:56747 MGI:1935121
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : acupuncture induced gene 1 product : seizure related 6 homolog like protein_id : NP_064366.2

name	EG625464 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375086 GeneID:625464 MGI:3648937
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899698.2

name	Myo18b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254133 GeneID:74376 MGI:1921626
definition	codon_start : 1 product : myosin XVIIIb protein_id : XP_995297.2

name	Adrbk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711830 CCDS:CCDS19545.1 GeneID:320129 MGI:87941
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0047696 - beta-adrenergic receptor kinase activity [Evidence IEA]; GO:0004703 - G-protein coupled receptor kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; beta ARK2 product : adrenergic receptor kinase, beta 2 isoform 1 protein_id : NP_796052.2

name	Adrbk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711828 GeneID:320129 MGI:87941
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0047696 - beta-adrenergic receptor kinase activity [Evidence IEA]; GO:0004703 - G-protein coupled receptor kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; beta ARK2 product : adrenergic receptor kinase, beta 2 isoform 2 protein_id : NP_001030608.1

name	Crybb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681035 CCDS:CCDS19546.1 GeneID:12961 MGI:88519
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0005212 - structural constituent of eye lens [Evidence IDA] GO_process : GO:0007423 - sensory organ development [Evidence IEA]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 function : structural protein note : betaB2-crystallin; Philly cataract product : crystallin, beta B2 protein_id : NP_031799.1

name	LOC100042920 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254171 GeneID:100042920
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479519.1

name	Crybb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946674 CCDS:CCDS19547.1 GeneID:12962 MGI:102717
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 product : crystallin, beta B3 protein_id : NP_067327.1

name	2900026A02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370348 GeneID:243219 MGI:1920194
definition	codon_start : 1 product : hypothetical protein LOC243219 protein_id : NP_766472.1

name	Gm854 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701931 CCDS:CCDS19548.1 GeneID:333048 MGI:2685700
definition	codon_start : 1 product : hypothetical protein LOC333048 protein_id : NP_001028600.1

name	Rutbc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370044 GeneID:52850 MGI:107320
definition	codon_start : 1 exception : mismatches in translation product : RUN and TBC1 domain containing 2 protein_id : NP_766306.1

name	Aym1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60678284 GeneID:503692 MGI:1891321
definition	GO_component : GO:0043080 - female germ cell nucleus (sensu Metazoa) [Evidence IDA]; GO:0043081 - male germ cell nucleus (sensu Metazoa) [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy product : activator of yeast meiotic promoters 1 protein_id : NP_001012744.1

name	C530024P05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893385 CCDS:CCDS19550.1 GeneID:320916 MGI:2445030
definition	codon_start : 1 product : hypothetical protein LOC320916 protein_id : NP_796266.1

name	Cmklr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469077 CCDS:CCDS19551.1 GeneID:14747 MGI:109603
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004944 - C5a anaphylatoxin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : chemerin receptor; G-protein coupled receptor 27 product : chemokine-like receptor 1 protein_id : NP_032179.1

name	LOC381707 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254533 GeneID:381707
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472024.1

name	D5Ertd40e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58082051 GeneID:231630 MGI:1098550
definition	GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : huntingtin interacting protein E product : huntingtin interactor protein E protein_id : NP_001010825.1

name	Sart3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394239 CCDS:CCDS19552.1 GeneID:53890 MGI:1858230
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] codon_start : 1 product : squamous cell carcinoma antigen recognized by T-cells 3 protein_id : NP_058622.1

name	LOC100041786 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254566 GeneID:100041786
definition	codon_start : 1 product : similar to 40S ribosomal protein S28 protein_id : XP_001478356.1

name	Iscu (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313484 CCDS:CCDS19553.1 GeneID:66383 MGI:1913633
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : NifU-like N-terminal domain containing product : nitrogen fixation cluster-like protein_id : NP_079802.1

clone name	MSMg01-375L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-380F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-415C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-115P24.T7 (MSMg01no115_p24.b1)	MSMg01-115P24.TJ (MSMg01no115_p24.g1)
ACC	AG327490	AG327491
length	1,468	734
length of high quality (start - end)	---	294 (81 - 374)
definition	CHROMAT_FILE: MSMg01no115_p24.b1 PHD_FILE: MSMg01no115_p24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:22:06 2005	CHROMAT_FILE: MSMg01no115_p24.g1 PHD_FILE: MSMg01no115_p24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:22:06 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GCGTTATCCTACCTGCCGCGCGAANCGACTAAAAGAGGCAGGCGGGCGCA TTCGCGTATAGACCGCATACTTCTAACCGATTTTTGATTATGGGGTACTC GCTTAGGCGTCCAACATACGCTTATTCGTTATTTATCGCGTCACCCCATG TGCGCGCCGGTAATGCGTCGACCCGCCGGGCTATATTAGTCGGTTATACT TTGTTCTATTATGATATACGCTGCGAAAAATTGACCGCTAATAGCTACCA CATTTAATAAATTAGTATAAACGGAGGATAGAGCCGCGCGCGCAAATATG GANGAATAGATATGCAGGCGGGATAGAATCGCAAGTTGTTGTGGAATCGA CGTGAGCATAACACGCACACGTGCGGAGAGTACCCGACAACGATATATAA ACGGGCGGGATACCGGATCGGTAGTACGGGAGATTTACGATGATCGATGC GAACCGCGATTACGTCTAGCGCGATATATAATCGGAACGGAGACGCCCCG TATAAGTATGGATAGTACGACATACGACACAGCCGGTGTAAGTACGCGGT TGTTATGCCGCGATATTAACCGCGCGCGCATACATGGAAAGCAAATGCGT ATCAAGTAGAAGCGATGAAAAAGGCGGGAAAAACGGGGAAAATACGACGA CATATTATCGTGTGTATGTTTCGACGATAGTAAAGCGCGAGATATCGGGA NCGGTCATGTGCGAGTATTATTTGAGACACTCGTGTGCCGTATATCCTTT GTTTTCGCCACGCCACCCTCGTGACCAACTATTAAGTTATAATATAATCG ACATACACCTGGGACCGACGCGCCATGAAATATACAAATACGCTCGGCGC GGAAATAATGAAGATGTTAGCGCGCGGTACGGAAGAGGAGACGTTGTTAG GACTGTGTAGAGTGCCAGTGCGTGGCGCGATAGCTATAAGGTATCGATGA GAATCTGCTAATATGTATATANCGACGCGGCCGNTCGATAATATAAGGNG CGCGCAAGAACGCGGCGCGCACGGAGCGAAAAGATACAAGACAGACGTCG CGCGCGGCACGCGCGCGATGACGATGTAACGCGGCTAAGATTGCTGCATA ACGCAGCGGTGANACTGTATGCTGTACGATGCTCGTTGATTATGAGGTAC TNCGCAACCGCACGACGTCGGTGAGACTATCGAATATCTCGTGCGTGATC GCACGATACGCGCAGAGAAAGAGNACGGTCGCANCGAAATGATCAGAGAT GAGCGCGCTGCGCGATTAGATAGACGATAACAAACTTAAGTGTTCTNTAG TGCGCGTCGCGGTGACGTACTCGGCGCGCGGACATATGATACTCTCGATA AGACACGTGNGGCGGGTAANAGTAATGCACGAATGTCGCGTTATTCAATA CGATGTGCGCGCAAGATGATATGTGCAGATGAGTGAAATACGTAATGAGA TCGCGGTAGACCCNCTCG	GTTTTTCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAGAGCTTAGCCTCAAGG GTCCATCCCAGTATCAACTGATGTTGTCCCCAAATGTTCAGCACTTTCTC AGCACTGCACCTTTGCCTATTCTGCTGCAGCTGCAGCTCAGAGGGGGTTT CCTCCTCTTCTGTCTTGATATTCTCACCCCAGCTTCAGACCTCAAACACC ACGCTCTAGAAAGCCCTGGCTAACAGAGACTGAGGTGGGGATCCCTCGGC CATTCGCTTCCAGTCTGGCACACACCTTGTTTTTTATGCATCTCTTTATT CCTTGGTCTCTCCCATTCACTGGAGGAGCCGCAGGGTGGGGGTTTCTACT CTTCTATTATGCTCTCAGCATGGCCCCCCCCCCACTGTGATATCTCATGT CTAGTTTCTATTCCCGTATCTCATATTCTTATTCCCCTCTTACAGTGTCT TCTTCCTTTGCCCCTTCCCCTTACCTTATCTTTTTCCTTTTTCTTGTTTT CCCTTATCCCTTCTCTATCTCCCATCATCATATATCACTATCCACTATCC AATTCATTCTTTCTTTTTCATACCCCCTTCTCCTCTATTCTCTTTTTTTT CACCCTTTAGCCCCTACTATCCTTTCCCCACTATCCCCTTTTTCCTCCTT TATCCTCCTATTACCTACCATTTTATTCTATTTT
quality values	Open. Hide. 10 10 10 10 10 10 10 9 10 12 12 10 8 8 8 8 8 8 9 11 11 11 11 3 0 3 11 11 16 16 18 15 10 8 8 8 8 8 9 6 8 6 6 8 8 8 6 6 6 8 10 13 10 8 8 6 6 8 8 8 8 10 8 10 11 11 8 10 6 6 8 8 8 6 8 8 8 8 8 8 8 8 11 7 7 8 8 10 10 10 11 11 11 8 8 8 8 6 6 6 6 9 8 8 8 8 8 8 8 8 8 8 8 6 6 10 6 8 8 8 8 8 6 6 8 8 11 11 11 18 12 8 6 6 6 8 8 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 6 6 8 8 8 8 8 8 8 8 7 10 10 11 8 8 8 8 9 10 12 11 11 11 8 8 10 8 8 8 9 10 8 8 6 6 7 6 6 6 8 10 8 8 8 8 8 6 6 10 8 8 8 8 10 8 8 10 12 10 9 7 8 10 8 9 9 15 13 6 6 6 6 8 8 8 8 8 8 8 7 7 10 8 8 8 8 8 9 11 11 10 11 11 12 8 6 6 6 8 6 8 8 8 8 8 8 8 9 8 8 8 8 10 7 9 8 6 8 10 10 8 8 8 8 10 11 8 8 8 8 8 8 8 9 9 9 10 10 9 9 3 0 3 9 10 10 9 10 10 15 11 10 10 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 7 6 8 8 8 8 8 10 10 8 14 13 13 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 10 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 10 9 9 8 8 8 8 8 9 13 11 11 11 10 10 10 9 10 10 10 11 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 8 10 8 8 8 10 15 12 8 8 8 8 10 8 6 6 6 6 8 8 8 8 8 8 8 8 10 10 13 6 6 6 6 6 6 8 8 8 9 10 10 14 10 9 10 10 10 10 8 7 8 6 6 6 6 7 7 6 6 8 8 8 8 8 8 8 8 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 10 10 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 10 8 8 8 8 8 8 8 8 10 8 6 8 8 8 8 10 6 7 8 6 9 8 8 7 7 10 10 10 8 8 7 6 8 8 8 6 8 8 12 13 10 10 8 6 6 6 6 6 6 6 8 8 10 8 8 8 6 8 6 6 6 8 14 17 19 12 10 10 10 8 8 8 8 9 11 10 8 8 8 8 8 10 12 10 7 8 6 6 6 6 8 6 6 8 8 8 10 9 9 9 8 8 6 6 6 8 6 8 8 8 8 8 8 8 8 9 9 9 9 9 9 10 9 8 8 8 10 8 8 8 8 8 10 9 9 10 10 8 8 8 8 8 8 3 0 3 8 8 8 6 6 8 10 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 6 8 6 6 6 8 9 10 10 10 10 7 6 6 7 6 6 6 6 7 6 6 6 8 7 7 9 8 13 8 8 8 8 8 8 8 10 10 8 9 8 8 8 8 10 10 11 11 11 11 11 11 11 10 9 10 8 10 7 6 6 6 8 8 8 8 8 8 8 14 10 10 8 8 8 8 10 10 10 11 11 10 8 8 8 8 8 10 10 8 8 6 6 6 6 6 6 8 7 6 6 6 6 6 8 6 6 6 7 8 7 8 10 10 8 8 8 12 10 11 8 9 9 9 9 6 9 9 7 9 10 9 9 9 9 10 12 10 10 8 8 8 8 8 8 8 8 11 8 9 10 10 10 9 6 8 8 6 6 8 8 6 6 6 6 8 6 8 8 10 10 10 8 8 7 8 8 8 8 8 8 10 10 7 7 8 8 6 6 8 6 8 10 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 10 6 6 8 8 10 9 9 9 9 10 9 8 8 8 8 8 8 10 10 11 11 9 10 11 12 12 15 8 6 6 6 8 8 10 3 0 3 6 6 6 8 8 8 8 8 8 3 0 3 8 6 6 6 10 8 8 8 8 8 6 6 3 0 3 8 10 12 10 13 10 10 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 10 8 8 6 7 6 7 8 8 8 8 6 6 6 7 8 8 10 8 8 10 8 8 8 6 6 6 8 8 8 12 8 11 10 11 10 9 10 8 8 8 8 8 8 8 8 7 9 8 8 6 6 6 6 8 8 8 6 8 6 6 6 6 8 12 9 9 9 11 10 6 6 6 8 8 6 7 7 7 8 15 14 16 9 9 10 8 8 10 3 0 3 10 8 6 6 6 8 6 8 8 8 10 8 8 7 6 6 8 6 8 8 9 8 6 6 6 6 8 8 8 8 8 8 9 8 8 8 3 0 3 8 8 8 8 11 10 8 8 8 8 6 6 6 6 8 6 8 10 10 10 8 6 6 6 8 6 6 8 7 8 8 8 8 8 9 10 8 6 7 7 8 8 10 10 9 9 7 8 8 11 10 6 6 6 8 8 6 6 8 6 9 8 8 8 9 10 9 10 10 3 0 3 8 7 9 10 10 11 10 3 0 3 6 6 8 8 8 8 8 8 8 8 8 13 10 10 10 10 8 10 10 9 9 9 9 9 9 9 9 9 10 10 8 8 8 8 8 8 8 10 8 8 6 7 6 7 8 8 8 10 8 6 8 6 6 8 8 7 7 7 8 8 3 0 3 6 8 11 10 10 10 10 11 13 15 15 13 12 12 10 9 9 7 8 8 8 8 6 8 8 8 8 8 9 8 8 8 8 8 8 7 7 7 10 8 6 6 8 8 8 9 9 9 9 10 10 10 6 6 6 6 8 8 8 11 3 0 3 9 8 8 8 6 6 7 3 0 3 6 6 6 8 6 8 11 10 9 6 6 8 8 10 10 9 8 8 8 8 8 8 8 8 6 6 6 6 6 6 10 10 10 9 10 9 9 10 10 9 8 9 9 8 8 8 8 6 6 6 6 8 8 9 9 8 8 8 8 8 8 10 8 6 6 6 6 6 6 6 8 8 8 8 9 9 10 9 9 10 9 10 13 8 10 10 6 8 6 6 6 3 0 3 9 10 10	Open. Hide. 8 8 9 9 7 7 6 6 6 6 11 12 10 10 10 9 18 10 12 15 17 8 8 14 21 27 41 41 30 30 30 26 26 32 44 30 27 12 12 6 6 6 6 7 7 7 8 8 8 8 18 18 26 23 10 13 15 27 27 44 39 37 37 37 25 26 10 10 9 9 9 9 9 9 10 10 19 25 24 28 30 31 31 53 53 53 53 57 50 50 53 50 47 40 40 40 47 47 47 57 57 53 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 47 47 48 47 47 47 48 47 47 47 50 48 48 37 37 35 36 42 47 48 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 59 68 68 57 57 57 57 57 57 57 57 57 57 57 54 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 57 57 52 52 57 57 57 57 52 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 47 47 47 57 59 44 59 59 68 57 57 57 57 57 57 57 57 54 54 57 48 48 48 47 43 43 39 41 46 48 54 68 68 59 59 59 59 48 48 59 59 59 59 59 57 57 57 57 57 57 57 39 59 47 37 35 37 39 48 48 50 50 47 41 28 27 16 14 14 13 11 10 10 10 10 23 30 59 59 59 59 59 59 53 57 57 57 53 48 57 39 37 30 28 43 43 57 57 57 57 57 68 68 57 57 54 54 30 34 13 13 12 15 12 12 12 12 24 21 21 23 20 20 20 23 28 28 23 21 12 11 18 12 11 9 14 15 17 17 12 13 9 9 8 8 8 10 13 15 19 19 19 19 16 15 9 9 9 8 8 8 8 8 17 14 14 13 11 8 10 8 8 13 15 19 12 12 12 12 12 12 12 12 10 8 8 7 6 8 8 8 6 7 8 10 10 10 9 10 10 9 9 8 8 8 8 8 8 8 13 12 12 12 12 12 14 16 12 14 15 15 19 13 8 9 8 8 10 8 8 8 8 8 10 11 10 10 10 10 14 9 11 11 12 8 8 6 6 6 6 8 10 10 10 11 11 10 10 10 8 8 8 12 12 10 12 12 15 10 9 9 9 11 12 10 10 8 12 8 9 11 10 8 8 9 10 10 10 8 8 9 9 9 9 12 10 11 10 13 8 8 8 8 8 8 8 8 10 10 9 10 11 16 11 10 13 10 10 8 8 8 10 8 8 12 13 13 12 11 10 8 7 6 8 8 8 10 6 6 8 8 8 8 8 8 20 14 16 8 8 8 12 10 10 17 9 12 12 12 12 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 12 12 9 9 12 12 21 24 34 32 13 10 8 8 8 8 8 11 11 11 13 13 15 17 19 19 10 12 9 11 11 11 12 16 15 13 11 11 8 8 8 8 15 10 10 8 8 10 13 14 16 13 13 10 9 8 8 8 8 10 10 10 8 9 6 8 6 6 8 8 8 8 11 11 10 8 11 8 8 8 8 11 11 18 10 6 6 6 6 6 11 11 12 15 18 13

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no115_p24.g1 MSMg01no115_p24.g1 CHROMAT_FILE:
MSMg01no115_p24.g1 PHD_FILE: MSMg01no115_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:06 2005
         (294 letters)



>mm_chr5_113225393_113226086
          Length = 694

 Score =  530 bits (274), Expect = e-155
 Identities = 285/294 (96%), Gaps = 9/294 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaagagcttagcctcaagggtccatcccagtatcaactgatgttgtccccaaatgttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agaagagcttagcctcaagggtccatcccagtatcaactgatgttgtccccaaatgttca 387

                                                                       
Query: 61  gcactttctcagcactgcacctttgcctattctgctgcagctgcagctcagagggggttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcactttctcagcactgcacctttgcctattctgctgcagctgcagctcagagggggttt 327

                                                                       
Query: 121 cctcctcttctgtcttgatattctcaccccagcttcagacctcaaacaccacgctctaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cctcctcttctgtcttgatattctcaccccagcttcagacctcaaacaccacgctctaga 267

                                                                       
Query: 181 aagccctggctaacagagactgaggtggggatccctcggccattcgcttccagtctggca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagccctggctaacagagactgaggtggggatccctcggccattcgcttccagtctggca 207

                                                                 
Query: 241 cacaccttgttttttatgcatctctttattccttggtctctcccattcactgga 294
           ||||||         |||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cacacc---------atgcatctctttattccttggtctctcccattcactgga 162


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space:   195225
Effective search space used:   195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information