CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCAACTGATGCTACCAAAGGACCGAGAAGCACTTGAAAAAATGTTCAA
CATTCTTAATCATCAGGGAAATTCAAATCAGAACAGCCTTGAGATTCTAC
CTCACTCTAGTCAGAATGGCTAAAGTCAAAAATTCAGGTGACAGCAGATG
CTGGCAAGGATGTGGAGAAAGAGCAACACTCTTCCATTGCTGGTGTGATT
GAAAGCTTGTACAACCAATATGACTAATTTCTTAGTGAAGAATTTAGTAC
TCTGAATTTTTTCTCTTAACATTGTTTTCATTGTGTCCTATACATATGGT
TGTGTTATGCATTAATTTTCATTGACTTCTAGGAAGTCTTAAGTTTCTTT
CTCTATTTTCTTTGACCCAGTGGGCATTGATTAGGGAATTGTTCAGTTCC
CATGAATGTGTAGTCTTTCTACTGTTTCTGTTATTGTTGAAGTCCAGCTT
TAGTCCATGGTCATCTGATAAGATACTTGGGGTTATTCCAATTGTCTTTT
ATCTGTTGAGACTTGTTTTGTGACCAAGTATACGGTCAACCTTGGAGCAA
GTTTTGTGAGGTGTTGAGAAGGTATATTCTTTTGTGTTTGGCTGAAAGGT
TTTTGATATCTGTTAGTTCCATTTGAGCCTTAACATCTGTTGGTACCTTT

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATCAGTACTCAACTGTTCAGCAGGAAT
GACTAGCGGTCTATGAGCTATTTCCTCCTCCGTAACAAATTGGTGACAAG
GCCAGCCTTGTATAGGTCCAGTGTACATAAAAGCAGTTGTTATGAGTTTC
AGATTTTAATAGTTGTATTAATTCTGGAGGTATTTTTAGCTCTTCACTCT
ATCTTTTAGCTCCTAGACACTTCCTGATTTCTTCTGCTATGTGTCCTGAT
CTACAAATGCCTTGTTCAGAAATGGGCCTTTGAACATCAGTCATTCTAGT
CTATCAGTAGCCATGAGTCTCTGGATTCACTGATATTCACTCTAAAGAGA
GGCTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAAT
GCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACC
CACTCCCCCCTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGT
TTGCAAGTCCAATTGGCCTCTCTTTCCAGTGATGGCCGACTAGGTCATCT
TTTGATACTTATGCAGCTAGAGTCAAGAGTTCCGGGGTAACTGGCTAGTT
CATAATGTTGTTCCATCTATAGGGTTGCAGATCCCTTTAGCTCTCTTGGC
TACC

Query= MSMg01no118_i18.g1 MSMg01no118_i18.g1 CHROMAT_FILE:
MSMg01no118_i18.g1 PHD_FILE: MSMg01no118_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:26 2005
         (464 letters)



>mm_chr5_55133308_55134171
          Length = 864

 Score =  843 bits (436), Expect = 0.0
 Identities = 458/466 (98%), Gaps = 2/466 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcagtactcaactgttcagcaggaatgactagcggtctatgagctatttcctcctccgt 60
           |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 530 atcaatactcaactgttcagcagtaatgactagcggtctatgagctatttcctcctccgt 471

                                                                       
Query: 61  aacaaattggtgacaaggccagccttgtataggtccagtgtacataaaagcagttgttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aacaaattggtgacaaggccagccttgtataggtccagtgtacataaaagcagttgttat 411

                                                                       
Query: 121 gagtttcagattttaatagttgtattaattctggaggtatttttagctcttcactctatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gagtttcagattttaatagttgtattaattctggaggtatttttagctcttcactctatc 351

                                                                       
Query: 181 ttttagctcctagacacttcctgatttcttctgctatgtgtcctgatctacaaatgcctt 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 350 ttttagctcctagacacttcctgatttcttctgctatgtgtcctgagctacaaatgcctt 291

                                                                       
Query: 241 gttcagaaatgggcctttgaacatcagtcattctagtctatcagtagccatgagtctctg 300
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gttcagaaatgggcctttgaccatcagtcattctagtctatcagtagccatgagtctctg 231

                                                                       
Query: 301 gattcactgatattcactctaaagagaggcttttttt--ccattttttattaggtattta 358
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 230 gattcactgatattcactctaaagagaggcttttttttcccattttttattaggtattta 171

                                                                       
Query: 359 gctcatttacatttccaatgctataccaaaagtcccccatacccacccacccccactccc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gctcatttacatttccaatgctataccaaaagtcccccatacccacccacccccactccc 111

                                                         
Query: 419 ctacccacccactccccccttttggccctggcgttcccctgtactg 464
           |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 110 ctacccacccactcccccgttttggccctggcattcccctgtactg 65


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)