Query= MSMg01no119_c08.b1 MSMg01no119_c08.b1 CHROMAT_FILE:
MSMg01no119_c08.b1 PHD_FILE: MSMg01no119_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:12 2005
(638 letters)
>mm_chr5_127833087_127834128
Length = 1042
Score = 739 bits (382), Expect = 0.0
Identities = 405/414 (97%), Gaps = 4/414 (0%)
Strand = Plus / Minus
Query: 229 aaaaagaatgcatttaccaagagcctggctcctgatgagtgtccaatatggtcacgtttt 288
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1041 aaaaagaatgcatttaccaagagcctggctcctgatgagtgtccaatagggtcacgtttt 982
Query: 289 attaactattactttaagggtgtctgcgcaggtgcatgggcacacgtggacacacccagc 348
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 attaactattactttaagggtgtctgcgcaggtgcatgggcacacgtggacacacccagt 922
Query: 349 ttttttcccactggactctggggttcaaacccagtttctcaaacttgcatgtcaagcact 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 ttttttcccactggactctggggttcaaacccagtttctcaaacttgcatgtcaagcact 862
Query: 409 ttactgatggagccctctcaaccagacacacatgcatgacagaatccagatatatatgca 468
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttactgatggaaccctctcaaccagacacacatgcatgacagaatccagatatatatgca 802
Query: 469 tgcactttcaagaggttaatagttcatagtttttctgattgagataaataatgcgctaat 528
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 801 tgcactttcaagaggttaatagttcatagtttttcggattgagataaataatgcgctaat 742
Query: 529 accaacggactg-ttttttttttaatggttcttctaacactg---aaaaaaaaaaaacaa 584
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 accaacggactgtttttttttttaatggttcttctaacactgaaaaaaaaaaaaaaacaa 682
Query: 585 agcccacccaagatcacatgacccaaatagtatttgtccagtatactttctcat 638
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacccacccaagatcacatgacccaaatagtatttgtccagtatactttctcat 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1042
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1032
Effective search space: 648096
Effective search space used: 648096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_c08.g1 MSMg01no119_c08.g1 CHROMAT_FILE:
MSMg01no119_c08.g1 PHD_FILE: MSMg01no119_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:12 2005
(304 letters)
>mm_chr5_127672141_127672844
Length = 704
Score = 582 bits (301), Expect = e-171
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 1 atattctctggctgtgatggcaaatctaactgaacatgagctgtgctggagacaggaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattctctggctgtgatggcaaatctaactgaacatgagctgtgctggagacaggaggt 260
Query: 61 gcgggctcagatagcgccgctctttcctagatggctgttgtcagcaccttggacagctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgggctcagatagcgccgctctttcctagatggctgttgtcagcaccttggacagctct 320
Query: 121 ctgttcctggcatctgaaggcatggagacaggaccagactcacaaactcccatagtttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttcctggcatctgaaggcatggagacaggaccagactcacaaactcccatagtttag 380
Query: 181 aaggctctccaaaaccctccctgacttgtgtcagtgggtcctagacaagctttcccaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggctctccaaaaccctccctgacttgtgtcagtgggtcctagacaagctttcccaaaa 440
Query: 241 gagtcaggtccccaaacactgtggctggaaacacacacacacacacacacacacacacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtcaggtccccaaacactgtggctggaaacacacacacacacacacacacacacacac 500
Query: 301 a 301
|
Sbjct: 501 a 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
