Query= MSMg01no128_o11.b1 MSMg01no128_o11.b1 CHROMAT_FILE:
MSMg01no128_o11.b1 PHD_FILE: MSMg01no128_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:09 2005
(275 letters)
>mm_chr5_124020090_124020767
Length = 678
Score = 458 bits (237), Expect = e-133
Identities = 251/257 (97%), Gaps = 3/257 (1%)
Strand = Plus / Plus
Query: 22 acttgattccacagttcttacttgtttgcttatgaaattcaagcccactacagcagctcg 81
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 222 acttgattccacagttcttacttgtttgcttatgaaattcaagcccactacagcagtttg 281
Query: 82 aaaacagtagccccaggaggtttctgtgtggtgtttttaaaggcagggttctctctgctg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaaacagtagccccaggaggtttctgtgtggtgtttttaaaggcagggttctctctgctg 341
Query: 142 acacaggttggaagttttagccatcctcagaaagtgaagttatttccctcaagctactca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acacaggttggaagttttagccatcctcagaaagtgaagttatttccctcaagctactca 401
Query: 202 gagcacggccacgtgtcttccatcctact---aacattttgccttgtctggtcccactcg 258
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 402 gagcacggccacgtgtcttccatcctactcctaacattttgccttgtctggtcccactct 461
Query: 259 tccaaatgatggccgtc 275
|||||||||||||||||
Sbjct: 462 tccaaatgatggccgtc 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 678
Length adjustment: 9
Effective length of query: 266
Effective length of database: 669
Effective search space: 177954
Effective search space used: 177954
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_o11.g1 MSMg01no128_o11.g1 CHROMAT_FILE:
MSMg01no128_o11.g1 PHD_FILE: MSMg01no128_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:09 2005
(343 letters)
>mm_chr5_124200733_124201475
Length = 743
Score = 601 bits (311), Expect = e-176
Identities = 335/343 (97%)
Strand = Plus / Minus
Query: 1 cattaagaatccacatggttggcgggtgtggtggtacacacctttaaatcccagcactca 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 690 cattaagaatccacatggttggcgggtgtggtggtgcacacctttaaatcccagcactca 631
Query: 61 gtaggcagaggctgacaaatctctttgagtttgaagccagcctggtctacaaagctaaag 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 630 gtaggcagaggctgacaaatctctgtgagtttgaagccagcctggtctacaaagctaagg 571
Query: 121 ctatataaagaaactcaaaacacaaaatttaaaaattaaaaaaagaagcaacaaagttga 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctatataaagaaactcaagacacaaaatttaaaaattaaaaaaagaagcaacaaagttga 511
Query: 181 agaacgaactgcatgaatgttatcctctgacctatgaatgtacacacacaataaatgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agaacgaactgcatgaatgttatcctctgacctatgaatgtacacacacaataaatgtaa 451
Query: 241 agaaaatatatgtatacatgtaggagcataatgtagacaggcatcgtggcaaacacccat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agaaaatatacgtatacatgtaggagcataatgtagacaggcatcgtggcaaacacccat 391
Query: 301 aatctcagcataccaaaggcaaagacagaaggataatttcaaa 343
||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 390 aatctcagcatgccaaaggcgaagacagaagaataatttcaaa 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
