CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTATCCCCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCA
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTAGCCTT
TTTGTCTTATTGGCAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTCAT
GAGGTTCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
CATTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTACCCACT
TTCTCCTCTAAAAGTTTGCAAAACACATGAAGCTTGGGAAGAACGAAGAC
CAAGGTGTGGATACTTTGCCGCTTCTTGGAATTGGGAGCAAGGCACCCAT
GGAAGGAGCTAAAGAGACAGAGTTTGGAGCTGAGATGAAAGGATGGACCA
TCTAGAGGCTGCCATACCCAAGGATCCATCCCATAATCAGCCTCCAAACG
CTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCTGATAT
AGCTGTCTCTTGTGAGACTATGCTGGGGCTTAGGCTCACAGTCAATTGGA
TGGATCACAGGGCCCCCAATGGAGGAGCTGGAGGAAGTACCCAGT

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATATCTCAGTTTACAAGCAATTAATCCCATCTG
GAGGGCCTCACCATTGGGATCTTTTTAAATGGTGCTCACCTGCCAAAGGC
ATCTTTAAGTATCATCCCATTGGGAGTTAAGGATTAAATGTGTGCCTTTG
AGTAAGGGAGAGAACCTGATAGTCACTCAAAAGTAATTCTGAGTATTTAG
TATGGTATGGAACAAGATTACATAAATTTTTGTAACTTTTCAGAGGCTCT
GAAAACAATGTTAGCTGTTGAAACAATTATGCTGGACCCTTATTTTTATG
AAAATTCCAGCGATGTTGGTTACTTATTTAGTTTTAAATGAGATATTATG
TGACTTAGGTCGGACTTGAATTCATAATCCTTCTAAGAACTGGATTACAA
ATATGCCACATTGAGTATAGCCTGAGCCCAGCAATTTTTTTCTACTACTA
ATTAACACTGAAGATGCCACCCAATGAGGCAGAAATATAGGATCTTACAC
CACTGTTCAGGTTGTTTCATGACTTTCTCTCTAGCCTATCTCCTCTTTCA
CTTGTGGGACTTAGTCCACTCTGAAAGCCCTTCTTGAAGTCTTCACAGCA
GTGTTACTGCCCAAGTTTTTCACAATATGAGCTAAATGGAC

Query= MSMg01no132_j08.g1 MSMg01no132_j08.g1 CHROMAT_FILE:
MSMg01no132_j08.g1 PHD_FILE: MSMg01no132_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:08 2005
         (580 letters)



>mm_chr5_51553683_51554662
          Length = 980

 Score = 1093 bits (565), Expect = 0.0
 Identities = 577/581 (99%), Gaps = 1/581 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatctcagtttac-aagcaattaatcccatctggagggcctcaccattgggatcttttt 59
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 908 atatctcagtttacaaagcaattaatcccatctggagggcctcaccattgggaacttttt 849

                                                                       
Query: 60  aaatggtgctcacctgccaaaggcatctttaagtatcatcccattgggagttaaggatta 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 aaatggtgctcacctgccaaaggcatctttaagtatcatcccattgggagttaaggatta 789

                                                                       
Query: 120 aatgtgtgcctttgagtaagggagagaacctgatagtcactcaaaagtaattctgagtat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aatgtgtgcctttgagtaagggagagaacctgatagtcactcaaaagtaattctgagtat 729

                                                                       
Query: 180 ttagtatggtatggaacaagattacataaatttttgtaacttttcagaggctctgaaaac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ttagtatggtatggaacaagattacataaatttttgtaacttttcagaggctctgaaaac 669

                                                                       
Query: 240 aatgttagctgttgaaacaattatgctggacccttatttttatgaaaattccagcgatgt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 668 aatgttagctgttgaaacaattatgctggacccttatttttatgaaaattccagcaatgt 609

                                                                       
Query: 300 tggttacttatttagttttaaatgagatattatgtgacttaggtcggacttgaattcata 359
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 608 tggttacttatttagttttaaatgagatattatgtgacttaggtcagacttgaattcata 549

                                                                       
Query: 360 atccttctaagaactggattacaaatatgccacattgagtatagcctgagcccagcaatt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atccttctaagaactggattacaaatatgccacattgagtatagcctgagcccagcaatt 489

                                                                       
Query: 420 tttttctactactaattaacactgaagatgccacccaatgaggcagaaatataggatctt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tttttctactactaattaacactgaagatgccacccaatgaggcagaaatataggatctt 429

                                                                       
Query: 480 acaccactgttcaggttgtttcatgactttctctctagcctatctcctctttcacttgtg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acaccactgttcaggttgtttcatgactttctctctagcctatctcctctttcacttgtg 369

                                                    
Query: 540 ggacttagtccactctgaaagcccttcttgaagtcttcaca 580
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggacttagtccactctgaaagcccttcttgaagtcttcaca 328


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)