Query= MSMg01no132_m08.b1 MSMg01no132_m08.b1 CHROMAT_FILE:
MSMg01no132_m08.b1 PHD_FILE: MSMg01no132_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:23 2005
(639 letters)
>mm_chr5_38407241_38408279
Length = 1039
Score = 1174 bits (607), Expect = 0.0
Identities = 631/639 (98%)
Strand = Plus / Plus
Query: 1 gaaccaacacctgaaaactgtctctgagctctacaacaaactgcagaatagctcccagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaccaacacctgaaaactgtctctgagctctacaacaaactgcagaatagctcccagtg 260
Query: 61 aaattaacaagttaattctatttagaaaatataaatctctcctccttgctgttcagaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattaacaagttaattctatttagaaaatataaatctctcctccttgctgttcagaacc 320
Query: 121 tcacagtatctggcttctgtttgcaatgggccagaccccaccgtgcctccatctccctcc 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 321 tcacagtatctggcttctgtttgcaatgggccagaccccaccatgcctccatctcccttc 380
Query: 181 tggaaaggacattccccacctgataatcatgcactgagtacctacctaccctgggccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaaggacattccccacctgataatcatgcactgagtacctacctaccctgggccagg 440
Query: 241 tgctctaggatcacttgggtctcaatgactaaagattcaagggaaagcgaagggggttgc 300
|||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 441 tgctctaggatcacttgggtctcagtggctaaagattcaagggaaagcaaagggggttgc 500
Query: 301 tgagacttcagctggaaaacccacaataacaaattgcctcttctggggtatctttttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagacttcagctggaaaacccacaataacaaattgcctcttctggggtatctttttgac 560
Query: 361 ccatttgccaaagcctttagacatccttccttctcaaagtgctcatcccaagaacccaca 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatttgccaaagcctttcgacatccttccttctcaaagtgctcatcccaagaacccaca 620
Query: 421 tcagagatctggtccatcttcaatatactgaagaggaagctgaggcccagggatttcctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcagagatctggtccatcttcaatatactgaagaggaagctgaggcccagggatttcctc 680
Query: 481 aaagattgcagcatcagcagcaccacgatcatgtggactgaaggtgtctgcctccaaatt 540
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagactgcagcatcagaagcaccacgatcatgtggactgaaggtgtctgcctccaaatt 740
Query: 541 cctatagtccttttaaatgtctccatgtggtggcatttataggaggggcttttgaggcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctatagtccttttaaatgtctccatgtggtggcatttataggaggggcttttgaggcag 800
Query: 601 ttaggtttcgatgtgtgtgtggcattctgtgtctaggac 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttaggtttcgatgtgtgtgtggcattctgtgtctaggac 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_m08.g1 MSMg01no132_m08.g1 CHROMAT_FILE:
MSMg01no132_m08.g1 PHD_FILE: MSMg01no132_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:23 2005
(606 letters)
>mm_chr5_38566278_38567283
Length = 1006
Score = 1033 bits (534), Expect = 0.0
Identities = 563/574 (98%), Gaps = 3/574 (0%)
Strand = Plus / Minus
Query: 1 aggagagcatggctgggggtcctctggcatgtggctattgttgtcctttcagctgtgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aggagagcatggctgggggtcctctggcatgtggctattgttgtcctttcagctgtgctg 515
Query: 61 ctccggcactcctgagtcctggagccctggcatctctccaccctcaggaatgacaaaatg 120
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 514 cttcggcactcctgagtcctggagccctggcatctctccacccttgggaatgacaaaatg 455
Query: 121 gccatcacactgtcctttgagtcctgtgggggcaggttctattctaatctctaccagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gccatcacactgtcctttgagtcctgtgggggcaggttctattctaatctctaccagcct 395
Query: 181 gccatgccctctggagtggggctgtgtgcttctgaccctgactcttagttcctggagtat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 394 gccatgccctctggagtggggctgtgtgcttctgaccctgactcttagttcctggagtgt 335
Query: 241 agggcttgctcttggccaccattcctgtgtctcactgaaaacagtgccttgaaacactag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agggcttgctcttggccaccattcctgtgtctcactgaaaacagtgccttgaaacactag 275
Query: 301 gcactcgttagcagtaagtgtggggctgagccaggggcatggggctgcctgccaactgc- 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcactcgttagcagtaagtgtggggctgagccaggggcatggggctgcctgccaactgct 215
Query: 360 --tttttttttttttttagatttgtcttatttgatgtgtatgagtgttttgcctgcatgt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tttttttttttttttttagatttgtcttatttgatgtgtatgagtgttttgcctgcatgt 155
Query: 418 atgtctgtgaaccatgtgtgtgccttgtgccagaagagcttagaaaatggtccggagagg 477
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 154 atgtctgtgaaccatgtgtgtgccttgtgccagaagagcttagaaaatggtctggagagg 95
Query: 478 gcattggatcccttgaaacttgagtcataggaggtcgtaagtgccacgtgggtgctgggt 537
||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 94 gcattggatcccttgaaacttgagtcataggaggttgtaagtgccatgcgggtgctgggt 35
Query: 538 cttcaaatctgggtcctttacaagagcaagtgat 571
||||||||||||||||||||||||||||||||||
Sbjct: 34 cttcaaatctgggtcctttacaagagcaagtgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
