TTTTCCATCTATXXXXXXXXXXXXXXXXXXXXXXXCTATTCAAAGAGGAT
CCGCGGAATTCCCTGATCTCTGCCTAATATTTGGCTGTGGGTGCTCTCTT
TCTGTTCCTATCAGTTGCTTAATAAAGCCCTTTTGATGAACATTTATAGC
CGATTTTCAATTTTGTTATTTTCAGGTTTTATTTTTTTCCTAATTCAAAT
CTGCTATAAACATTTCTGTCAATATTCTCTCCTCTCCCTCCCTCCCTCCC
TCCTCTCTCTGTCCCCCTCCCTTCTCTCTTTTTATCATGAGATTCTTCTT
TTATAATACATCCCAAATACAGTTACCCTCCCTCCACTTTTTTATTTATT
CTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCA
CTTTGTGGACCTGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCT
CCTGAGTGCTGGGATTAAAGGTGTGCGCCACCACTGCCCGGCACACTCCT
TCCACTCTTTACATCCCTCCCCTTCCTCCATCCACTCTTCCATTCAGAAA
AGAGCAGTCCTCAAAGAGACAACAACCAAACCAACAAAACAAAATACAAT
AAGAAGTCAAAAGCTCTCACAGAGAGGTTGTACAAATAGCCGAATAGAAG
GAAAAGAATCCCAAGAACAAGCAAAAGAGTCAGAGACACACTTGTTCCCA
CTGTTAGTCACAA

NNNNCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGTGACTTTCTGAGCTA
CATGGTGAGCAACAGACATATAGCATGCCCATTCTTCATACACTGTGGTG
ACAATATGATGCCAGGCCATCTACATTTAGGAATACAAAGACACTTCTAG
TTCTCAGTGAAGTCAAAGCAATAAAAAATAGCAGGAAAAGGGAAAATAAT
AGTTTTAAAACTTGTAGTACGATATTGAGAAGAAAAAAGAAGAAAGAAGA
GCTAGAAAAATATTGATGCCTTCCCATCTACAAAACTGTAACAAACTAAA
AAATTAAGTAGAATCTCTAAAGAGAAAAATAGCCCAAGGACAGTGAAGAG
GACACTGACCAAGTAACCCCTAAGGGTGTACTATAGATTTTCATTCAACT
ACAAAGTGTAATTTATACTGCCACCTTCAGATTTTATCAAGGACAACCAA
TGTGAGGTCATTCTTCTTTACAAAAATAGTATGGTTGTGTATAGCATGAT
TATTTCCAAAGTATAAAGTAAGAGTGATAATTGACTGTCCATTCCTTATT
AAGTTTACATTGACTAACAACTCAAATTATAGGTAATAAATTATAGATAG
ACAGATAGAAGGAAAGAAAGGTAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAAATAGGATACAT

Query= MSMg01no136_j20.g1 MSMg01no136_j20.g1 CHROMAT_FILE:
MSMg01no136_j20.g1 PHD_FILE: MSMg01no136_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:03 2005
         (633 letters)



>mm_chr5_79534602_79535634
          Length = 1033

 Score = 1145 bits (592), Expect = 0.0
 Identities = 616/624 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggtgactttctgagctacatggtgagcaacagacatatagcatgcccattcttcatac 60
           ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 763 caggtgactttctgagctacatggtaagcaacagacatataggatgcccattcttcatac 704

                                                                       
Query: 61  actgtggtgacaatatgatgccaggccatctacatttaggaatacaaagacacttctagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 actgtggtgacaatatgatgccaggccatctacatttaggaatacaaagacacttctagt 644

                                                                       
Query: 121 tctcagtgaagtcaaagcaataaaaaatagcaggaaaagggaaaataatagttttaaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tctcagtgaagtcaaagcaataaaaaatagcaggaaaagggaaaataatagttttaaaac 584

                                                                       
Query: 181 ttgtagtacgatattgagaagaaaaaagaagaaagaagagctagaaaaatattgatgcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttgtagtacgatattgagaagaaaaaagaagaaagaagagctagaaaaatattgatgcct 524

                                                                       
Query: 241 tcccatctacaaaactgtaacaaactaaaaaattaagtagaatctctaaagagaaaaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcccatctacaaaactgtaacaaactaaaaaattaagtagaatctctaaagagaaaaata 464

                                                                       
Query: 301 gcccaaggacagtgaagaggacactgaccaagtaacccctaagggtgtactatagatttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcccaaggacagtgaagaggacactgaccaagtaacccctaagggtgtactatagatttt 404

                                                                       
Query: 361 cattcaactacaaagtgtaatttatactgccaccttcagattttatcaaggacaaccaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cattcaactacaaagtgtaatttatactgccaccttcagattttatcaaggacaaccaat 344

                                                                       
Query: 421 gtgaggtcattcttctttacaaaaatagtatggttgtgtatagcatgattatttccaaag 480
           ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 343 gtgagatcattcttctttacaaaaatattattgttgtgtatagcatgattatttccaaag 284

                                                                       
Query: 481 tataaagtaagagtgataattgactgtccattccttattaagtttacattgactaacaac 540
           ||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 283 tatgaagtaagaatgataattgactgtccattccttattaagtttacattgattaacaac 224

                                                                       
Query: 541 tcaaattataggtaataaattatagatagacagatagaaggaaagaaaggtagagagaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcaaattataggtaataaattatagatagacagatagaaggaaagaaaggtagagagaga 164

                                   
Query: 601 gagagagagagagagagagagaga 624
           ||||||||||||||||||||||||
Sbjct: 163 gagagagagagagagagagagaga 140


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)