Query= MSMg01no139_e23.b1 MSMg01no139_e23.b1 CHROMAT_FILE:
MSMg01no139_e23.b1 PHD_FILE: MSMg01no139_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:40 2005
(657 letters)
>mm_chr5_58031567_58032621
Length = 1055
Score = 1189 bits (615), Expect = 0.0
Identities = 646/657 (98%), Gaps = 3/657 (0%)
Strand = Plus / Minus
Query: 1 caacaacaggagaacacaaaggatatagtgactcctagaattggtatgtatgtacttgag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 660 caacaacaggagaacacaaaggatatggtgactcctagaattggtatgtatgtacttgag 601
Query: 61 cagcatgtagcttttaagactgataaacaaaacagaacagaacaaaaaacaaaacaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cagcatgtagcttttaagactgataaacaaaacagaacagaacaaaaaacaaaacaacaa 541
Query: 121 gaaaagcaagacaaaccttaaattttatagacttgaaacatgtgtgtgtttattgaacat 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 540 gaaaagcaagacaaaccttaaattttatagacttgaaac--gtgtgtgtttattgaacat 483
Query: 181 gagttgacttcctgaaatgcacaccgtgtttgacactcccagctttgtgataaaacgaag 240
|||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 482 gagttgtcttcctgaaacgcacaccgtgtttgacactcccagctttgtgatgaaacgaag 423
Query: 241 ctatggctacaagaagaggcttctttttgccagtccacaaccacagattcagtctctgat 300
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 422 ctttggctacaagaagaggcttctttttgcaagtccacaaccacagattcagtctctgat 363
Query: 301 cctgtatactatgattaattcagatatcttctgccttcaagtccctgccatgtttgagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cctgtatactatgattaattcagatatcttctgccttcaagtccctgccatgtttgagtt 303
Query: 361 cctattctgagttccttcagtgatgaacagtgatatgaaagtgtaagccaaataaactct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cctattctgagttccttcagtgatgaacagtgatatgaaagtgtaagccaaataaactct 243
Query: 421 ttctgctccaactcgctttctagttgaggtgtttcaatgcagttctcaataccctatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttctgctccaactcgctttctagttgaggtgtttcaatgcagttctcaataccctatcta 183
Query: 481 agacattgttagagattagactggtaaaacaaaataacatcaacaaaaaccctaattaat 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 182 agacattgttagagattagactggtaaaacaaaataacgtcaacaaaaaccctaattaat 123
Query: 541 acattcttgtatttttttttctaagcacttttttgactcagttgcttttgcttgttgtct 600
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 122 acattcttgta-ttttttttctaagcacttttttggctcagttgcttttgcttgttgtct 64
Query: 601 catttaagcttactttagagtgagaatatcagctttttgcagagaaattttcaagcc 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 catttaagcttactttagagtgagaatatcagctttttgcagagaaattttcaagcc 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1055
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1045
Effective search space: 676115
Effective search space used: 676115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_e23.g1 MSMg01no139_e23.g1 CHROMAT_FILE:
MSMg01no139_e23.g1 PHD_FILE: MSMg01no139_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:40 2005
(651 letters)
>mm_chr5_57880824_57881870
Length = 1047
Score = 1216 bits (629), Expect = 0.0
Identities = 644/651 (98%), Gaps = 4/651 (0%)
Strand = Plus / Plus
Query: 1 tcaaatatttggttgtggctctgtgttatctatttccattggctggtgtcattaatagtt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaatgtttggttgtggctctgtgttatctatttccattggctggtgtcattaatagtt 260
Query: 61 tcaaggattggttcttgcctatagggtaggtctctgttttgaccagtcattggttggcca 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tcaaggattggttcttgcctatagggtaggtctctgttttgactagtcattggttggcca 320
Query: 121 ttccctacatctctgctatgtctttgtccctgaacatattgtaggcagggcacattttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccctacatctctgctatgtctttgtccctgaacatattgtaggcagggcacattttgg 380
Query: 181 gtccaaggtgtaacggatgggctcctgtcctcaaggagtactgcatggctataggaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtccaaggtgtaacggatgggctcctgtcctcaaggagtactgcatggctataggaactg 440
Query: 241 gtcactttaaggttcatattccctactgctaggagtctcacctataacaggacccaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcactttaaggttcatattccctactgctaggagtctcacctataacaggacccaatag 500
Query: 301 aacttggagctcccccagggttgacttgttttgtttatatatttatatacttactctttg 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacttggagctcccccaggattgacttgttttgtttatatatttatatacttactctttg 560
Query: 361 tatgcactcctatgataagcttgtacataacttccccttctgacactggatcttccctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgcactcctatgataagcttgtacataacttccccttctgacactggatcttccctat 620
Query: 421 ctattacatctagggaagcattactcatctttcagaattcacctggaatagacttttcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctattacatctagggaagcattactcatctttcagaattcacctggaatagacttttcaa 680
Query: 481 cattgcctttttactgatttttcagtctctgagtctatcacttattcattgaaccaatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattgcctttttactgatttttcagtctctgagtctatcacttattcattgaaccaatat 740
Query: 541 taactgagactttactatgtgaaagagtgttctatgttacagaatttatctagcatatat 600
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 taactgagactttactatgtga----gtgttctatgttacagaatttatctagcatatat 796
Query: 601 tgattttttacaaacaatagaaaatagaaggaaaagaaataaacatgttta 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tgattttttacaaacaatagaaaatagaaggaaaagaaataaacatgttta 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1047
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1037
Effective search space: 664717
Effective search space used: 664717
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
