Query= MSMg01no139_f12.b1 MSMg01no139_f12.b1 CHROMAT_FILE:
MSMg01no139_f12.b1 PHD_FILE: MSMg01no139_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:43 2005
(243 letters)
>mm_chr5_73530618_73531261
Length = 644
Score = 354 bits (183), Expect = e-102
Identities = 189/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctcgatgcc-cggtcaggttagcactcacattagcattcacagctaaatcct 62
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggaattctctcgatgccaaggtcaggttagcactcacattagcattcacagctaaatcct 309
Query: 63 gatacgacttcatagtgtaacctcaaagagtgctaagttttggttctcaatgccttcccg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gatacgacttcatagtgtaacctcaaagagtgctaagttttggttctcaatgccttcccg 249
Query: 123 aggttgtacataattatatcctgatatgattctttaattaatgtgctctctctctctctc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aggttgtacataattatatcctgatatgattctttaattaatgtgctctctctctctctc 189
Query: 183 tctctctctct 193
|||||||||||
Sbjct: 188 tctctctctct 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no139_f12.g1 MSMg01no139_f12.g1 CHROMAT_FILE:
MSMg01no139_f12.g1 PHD_FILE: MSMg01no139_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:43 2005
(381 letters)
>mm_chr5_73440382_73441162
Length = 781
Score = 698 bits (361), Expect = 0.0
Identities = 376/381 (98%)
Strand = Plus / Plus
Query: 1 aggcttctacacaagccactttcctggattggtagatgagccttgttcatctcactaact 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aggcttctacacaagccactttcctggattggtagacgagccttgttcatctcactaact 260
Query: 61 tgagccttgtggactcattaacttggccacctgagccttgggatgggagccagaacttca 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tgagccttgtggactcattaacttggccacctgagccttggggtgggagccagaacttca 320
Query: 121 cataactaacttccactccctaacacagaggttatctctattatttaaaagttatgtttc 180
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cataactaactttcactccctaacagagaggttatctctattatttaaaagttatgtttc 380
Query: 181 agggctggagagatggctcagtggttaagagcgctggctgctctttctgaggacctgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggctggagagatggctcagtggttaagagcgctggctgctctttctgaggacctgggt 440
Query: 241 tcaattcccagcacctacatggcagctcacaactgtctgtcactcctgttccaggggatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaattcccagcacctacatggcagctcacaactgtctgtcactcctgttccaggggatc 500
Query: 301 tgacaccctcatacagacattcatgcaggcaaaacaccaatgtacatttttttaaaaaag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 tgacaccctcatacagacattcatgcaggcaaaacaccaatgtacattttttaaaaaaag 560
Query: 361 tgtgtgtatacgtgtgcagct 381
|||||||||||||||||||||
Sbjct: 561 tgtgtgtatacgtgtgcagct 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
