Query= MSMg01no140_b11.b1 MSMg01no140_b11.b1 CHROMAT_FILE:
MSMg01no140_b11.b1 PHD_FILE: MSMg01no140_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:42 2005
(637 letters)
>mm_chr5_8718465_8719502
Length = 1038
Score = 1210 bits (626), Expect = 0.0
Identities = 635/638 (99%), Gaps = 1/638 (0%)
Strand = Plus / Plus
Query: 1 actagcttgacctctgacctcc-tacacatgtgctcacctctgacagatatatacaaaga 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagcttgacctctgacctccatacacatgtgctcacctctgacagatatatacaaaga 260
Query: 60 aatgacttatgatacaccctgttaccaagaaagccaaaggagagtatttagatgaatttg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgacttatgatacaccctgttaccaagaaagccaaaggagagtatttagatgaatttg 320
Query: 120 tgaatgacagaaatacctcccccaacaaaggcagaatgtagatgcattgagacctgcctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatgacagaaatacctcccccaacaaaggcagaatgtagatgcattgagacctgcctt 380
Query: 180 tattccagaaaccgactctattctagcatagaaaggctcttccaatcactaaactgtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattccagaaaccgactctattctagcatagaaaggctcttccaatcactaaactgtaat 440
Query: 240 gagtgatacagggaagatttggaatgctttttcagtgtttgaactaacaacccttcaaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtgatacagggaagatttggaatgctttttcagtgtttgaactaacaacccttcaaat 500
Query: 300 atttttttccaaaggtttttacaaatggtggcccccctgaaacccagcggcagaacagca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttttttccaaaggtttttacaaatggtggcccccctgaaacccagcggcagaacagca 560
Query: 360 acttgttttccttgttgtttctgatccttgggatcatttctttcattacattttttcttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttgttttccttgttgtttctgatccttgggatcatttctttcattacattttttcttc 620
Query: 420 aggtaaatgatttgtttttacttcattaactcaagtagatttattaaaatatgtattggt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggtaaatgatttgtttttacttcattaactcaagtagatttattaaaatatgtattggt 680
Query: 480 ctttctcatgaagtcattcctccttaaccatggccaatgagagctggattatttttaatc 539
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 ctttctcatgaaatcattcctccttaaccatggccaatgaaagctggattatttttaatc 740
Query: 540 ctctgactctatcctcatcctctctgtcccaaccaaccatgtcataaatggaaacagtga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctctgactctatcctcatcctctctgtcccaaccaaccatgtcataaatggaaacagtga 800
Query: 600 tgtaataacattgaacagattgctctgtgtagtataga 637
||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtaataacattgaacagattgctctgtgtagtataga 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_b11.g1 MSMg01no140_b11.g1 CHROMAT_FILE:
MSMg01no140_b11.g1 PHD_FILE: MSMg01no140_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:42 2005
(583 letters)
>mm_chr5_8796768_8797750
Length = 983
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%)
Strand = Plus / Minus
Query: 1 tgactgatgcagatatttgcgtgtagcaggtctttttctgtctacttgtaactgactgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tgactgatgcagatatttgcgtgtagcaggtctttttctgtctacttgtaactgactgtg 724
Query: 61 acctaacttgctggcaactcagtggctgagaaatgtcaacctgagatagacagagttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 acctaacttgctggcaactcagtggctgagaaatgtcaacctgagatagacagagttcct 664
Query: 121 tgtctcaatgacattgaagcactgaccacctgggtggagactcctgtttcttctaccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgtctcaatgacattgaagcactgaccacctgggtggagactcctgtttcttctaccaag 604
Query: 181 atgtctgtttccacagataccaagaagtagccacctttgtttttatttaactcattgtct 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atgtctgtttccacagatagcaagaagtagccacctttgtttttatttaactcattgtct 544
Query: 241 atggtgtgagctggggtctccttcttgaacaagatggagattttacttggtctttaaaat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atggggtgagctggggtctccttcttgaacaagatggagattttacttggtctttaaaat 484
Query: 301 tggctttattaaggtaaggacacaccacgaaaggagatctgtgccttacctgctcctcgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tggctttattaaggtaaggacacaccacgaaaggagatctgtgccttacctgctcctcgg 424
Query: 361 gggcttcagggtgaggacagagcagtttgtcatcctagggcccagaccatcttttccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gggcttcagggtgaggacagagcagtttgtcatcctagggcccagaccatcttttccctg 364
Query: 421 gctgttagtgtggttacctcatgtctgactacgagccctgttactcgttcccaggcctgc 480
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 363 gctgttagtgtggttacctcatgtctgactacgagccctgttactagctcccaggcctgc 304
Query: 481 aggttcttccgctcttcggcttccttttaaccccggcaccccttctcatctcaacatgcg 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aggttcttccgctcttcagcttccttttaaccccggcaccccttctcatctcaacatgcg 244
Query: 541 tgggacttgcagttcacccttaaaatctgtggggagcgagctc 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgggacttgcagttcacccttaaaatctgtggggagcgagctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
