Query= MSMg01no142_h10.b1 MSMg01no142_h10.b1 CHROMAT_FILE:
MSMg01no142_h10.b1 PHD_FILE: MSMg01no142_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:10 2005
(265 letters)
>mm_chr5_126872714_126873379
Length = 666
Score = 505 bits (261), Expect = e-147
Identities = 264/265 (99%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 2 cccccttctgggcactggctgactcatcaatatgccactgtccagctgtatctcaggatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cccccttctgggcactggctgactcatcaatatgccactgtccagctgtatctcaggatc 340
Query: 62 cttgaccaacatctccccagctttctaataaacacttacttgtcccaagtcttacttgtc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cttgaccaacatctccccagctttctaataaacacttacttgtcccaagtcttacttgtc 280
Query: 122 tctaataaacacttctaagaagtcctttgaggtaa-ttttttttttttgcttcagtttat 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 279 tctaataaacacttctaagaagtcctttgaggtaatttttttttttttgcttcagtttat 220
Query: 181 tttatacagatacactcatgtgctccacatgcatgcagtgccctaggaggccagaagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tttatacagatacactcatgtgctccacatgcatgcagtgccctaggaggccagaagagg 160
Query: 241 gcaccaaataccctgggactggagt 265
|||||||||||||||||||||||||
Sbjct: 159 gcaccaaataccctgggactggagt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 666
Length adjustment: 9
Effective length of query: 256
Effective length of database: 657
Effective search space: 168192
Effective search space used: 168192
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no142_h10.g1 MSMg01no142_h10.g1 CHROMAT_FILE:
MSMg01no142_h10.g1 PHD_FILE: MSMg01no142_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:10 2005
(346 letters)
>mm_chr5_126725055_126725800
Length = 746
Score = 615 bits (318), Expect = e-180
Identities = 339/346 (97%)
Strand = Plus / Plus
Query: 1 tccatccagacacaaacatgttggattctccagaccacatcctgtaagacaggctaataa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatacagacacaaacatgttggattctccagaccacatcctgtaagacaggctaataa 260
Query: 61 atccctttttaatctatatttccattctgtcagttctcttcttttaaagaaccctgggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccctttttaatctatatttccattctgtcagttctcttcttttaaagaaccctgggtg 320
Query: 121 gtcagttactatcaacctgcattcttgtattcctgggaactagcctggtaaagagcaatg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gtcagttactatcaacctgcattcttgtattcctgggaactagcctggaaaagagcaatg 380
Query: 181 cgttctgcgtctaacatggtgacagaccacaaaggcatgtatagacatctctttccatag 240
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 cgttctgcatctaacatggtgacaaaccacaaaggcatgtatagacatctctttccatag 440
Query: 241 tttctgatagacatataaaaatcctcatacatacgagagaagtgcttcgttccagactta 300
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 441 tttctgatagacatataaaaatcctcagacatacgagagaagtgcttcattccagactta 500
Query: 301 acctgaagcagtattacccctgggacagatccaggagtgtctttgg 346
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 acctgaagcagtattacccctgggacagatccagtagtgtctttgg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
