CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAAGATTCCATTTCAAATAAAAGTCTTGGCCATCAGAGACAAAAT
GATGCCAAAATAAGTTAGTTGAAACATACTGTTTAGCTGGGTGTGTTGTA
ACAGGCTTATAATCACAGCAATTTCATGGGCAAGGAAAGAAGATTAGGAA
AAATTCAAGTTCTTCCTTAGCTACAGAGTAGATTCAAATTCAAGGCCAAA
CAGTGCTGTGTATGATCTTTGTAAAAAAAAAAAAAAAAAAAAAGCATGTA
TTCAATGTATGCATGCATGTATGTATGCATGCATAGCTAAAATTTTAATT
CCTAGCTCATTGCTCTGTGAAACCACTGTGTTTACTTGCCAAAGCTACCC
TCCCTATGTGGTAAAAAAATACATCAATGAAATGTAGTCAAATAACAAAA
TGCTATTGCTTCCTCATAAAATGGTGATAGGCGGAAACACACATCTTAAA
ATTGCATTCCTGAGAAATTGGAAGAAAGGAGCTGCCAGTTATTTACAGTT
AGATATAGCAGCAAAAGACTAATAGAAATTATAAAGATATAAATATGTGT
AAAGTTACCCACTTATTTACTCCCATAATATGAGAACACCAAATAATCAA
GATTAGCTTCCAAGTTCATTGGACTGTGCGTAATACAGAGCATTACCAGT
TTATACTAGCAGA

CCATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAAGAGTGTAGGCAGACCACGAAGAG
AGAGACCATGCCTGGAAACTACTGACACCAGAAAGAGTTTGTTCTGGGCT
TGAGATGCCTCCACAGTGGGTCTCAGTTCTACCAGTACTCTAGAGACCAG
GAGATGTAAACAGCCAGGTGTTTCCTCTGGCTCCCTAAACATGCTTGTTA
TTACCAGAGAGATGTCTCCCTAAACATGCTTATTATTACCAGAGAGACGG
CTTACTCAGAATGATTATCAACTGAACAGAGTGTAATTTGGCTTCAGAGC
CAACAGTCCCGTGGTTTCACAAGTCAGATGGTAAAATCACAATTCTCAAG
TACTTTAGTGCTTGGAGATGCTCAGATCTCCTACCCAGTTATGCTAGGCC
CAGGACCTGGGCTTCAAAAGTCATGCAGTGAGAGAACATTGTCAAAATAC
TATCAATTGCCCCTACTAAAACACCAAACACCAAAGAAGTAGCAATAGGA
TCCCTTCTCTCTCTGGGTGTCTCCACTCTGACAGGTCTGTGGTTACAGTG
TAGAAATGCCTGCCACTCACAACTGGTGATTAAAAAAGGGAAAGTGGGAA
CTGTCATGCACAGGATGTCAGAGTCATTCTGAGAAAC

Query= MSMg01no143_p18.b1 MSMg01no143_p18.b1 CHROMAT_FILE:
MSMg01no143_p18.b1 PHD_FILE: MSMg01no143_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:41 2005
         (642 letters)



>mm_chr5_10386077_10387112
          Length = 1036

 Score =  940 bits (486), Expect = 0.0
 Identities = 550/576 (95%), Gaps = 10/576 (1%)
 Strand = Plus / Minus

                                                                        
Query: 71   gggtgtgttgtaacaggcttataatcacagcaatttcatgggcaaggaaagaagattagg 130
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 gggtgtgttgtaacaggcctataatcacagcaatttcatgggcaaggaaagaagattagg 977

                                                                        
Query: 131  aaaaattcaagttcttccttagctacagagtagattcaaattcaaggccaaacagtgctg 190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  aaaaattcaagttcttccttagctacagagtagattcaaattcaaggccaaacagtgctg 917

                                                                        
Query: 191  tgtatgatctttgt----aaaaaaaaaaaaaaaaaaaaagcatgtattcaatgtatgcat 246
            ||||||||||||||    ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 916  tgtatgatctttgtaaaaaaaaaaaaaaaaaaaaaaaaaacatgtattcaatgtatgcat 857

                                                                        
Query: 247  gcatgtatgtatgcatgcatagctaaaattttaattcctagctcattgctctgtgaaacc 306
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 856  gcatgtatgcatgcatgcatagctaaaattttaattcctagctcattgctctgtgaagcc 797

                                                                        
Query: 307  actgtgtttacttgccaaagctaccctccctatgtggtaaaaaaatacatcaatgaaatg 366
            |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 796  actgtgtttactcgccaaagctaccctccctatgtggt-aaaaaatacatcaatgaaatg 738

                                                                        
Query: 367  tagtcaaataacaaaatgctattgcttcctcataaaatggtgataggcggaaacacacat 426
            || |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737  taattgagtaacaaaatgctattgcttcctcataaaatggtgataggcggaaacacacat 678

                                                                        
Query: 427  cttaaaattgcattcctgagaaattggaagaaaggagctgccagttatttacagttagat 486
            |||||||||||||||||||||||||||||||||||||     |||||||||||||| |||
Sbjct: 677  cttaaaattgcattcctgagaaattggaagaaaggag-----agttatttacagttggat 623

                                                                        
Query: 487  atagcagcaaaagactaatagaaattataaagatataaatatgtgtaaagttacccactt 546
            |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 622  atagcagcgaaagactaatagaaattataaagttataaatatgtgtaaagttacccacat 563

                                                                        
Query: 547  atttactcccataatatgagaacaccaaataatcaagattagcttccaagttcattggac 606
            |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 562  atttactcccataatatgtgaacaccaaataatcaaaattagcttccaagttcattggac 503

                                                
Query: 607  tgtgcgtaatacagagcattaccagtttatactagc 642
            ||||||||| ||||||||||||||||||||||||||
Sbjct: 502  tgtgcgtaacacagagcattaccagtttatactagc 467


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1036
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1026
Effective search space:   648432
Effective search space used:   648432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)