XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCCA
AAGTGCCCACGAAACCGAGCACAGATCAAGAACTTGCAGTGACTTTCAGC
CTTGGCACATGAGGTTCCTTCCTGGAGACCTTTTCTGTGGGAGCTACAAG
CCTCCCTCTCTTTATAACATTATCTTATGACCTTTAAATTTTGACCTTTG
GGCTTCTAACAAAGTGGATTTTTTTTCTCTTAAAAAGATACAGTAACCCT
AATGTTTCCAAACTTGAAGAATTAGTTAAATAGCCTATTAATAATCCTAG
CAGCTATTATTTATTGAGGACCTACTTGAAACATATCTTCTGTAATCCTC
AGAATTGCCTTCTGGGGCACTTATAATTAGCTCCACTTACAGCTATCAGA
ACTGAACCCCACAGATACTAACTCACCCTGGGGCATGCAGCTGACAGGCC
GCCGCAGCAGGACTGAGGCCTGGTTCTGACTCCAGAGCCCACGCTCGCCT
CTCGTCAAGCTGAGTCTCCTGTTCCAGTTACTTGATGAGCTCGCCTCCTG
CTTTTGATCATTGCTCCCATGGCTTCAGGTGGTTTTGCTCATTTATTTAG
AAGCCCAGCTTTCAATTTGAAATAACACGGGCTTGTGTGGGTTTGGGTAG
AGGTAGGGAGAAGTGTCCCATATCCCGATACCGATAGAATTAACACTTCG
GCATTCTCTTTTGATCTGCTGGC

NCAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTTACGATTCAATTCCAGTATGATGA
TGTAACGCTTCTTTTCAAAGATATTTCTTTGAGGGTTTCATACAACATCA
TATTCACTGCCCCTTTCCTACCCAACCAACTTTGTATCCTTTTCTTGTTT
TGCTTTTTAGAAATGCTTCAAAAATCAATTAGTGCTGTCCAAATACTCTT
GGATGTGTGGTTTTCCACTGGATAGGGGCTGACTCACAGGGGCTATACTC
AGAGACAGTGCTCTCCCTATCCTGGCAGCTAATAACTCCAGGGCTTATGG
TGGGATAGTATACCCAGCTGCTCTCTTCTTGCTGAGGTTGGTCTGGCTTA
AGCTTGCAGAGGTTCCCCCCACTCTGATTCAGCCATTGTGAGCTCCTTTG
TGCAGCTGTTGTGCTGTGTCCAGAAGACAGTTTCCTTGTGGTCATACACT
GCCTCTGACTCTCAAGCTCTTTCCATGCCATCTTCTGAAATGATCCCTGA
GCCTCAAGGAGGGTGTGGCACAGTATAGATGTTCCTTTTAGGGCTGAGAA
TTCTCCAGTCTCTCATTCTCTGCACCTTGACCACTTGGTGGTCTCTATGT
TATCCATCATTTCCTGCAAACTGAAGCTTCTCAGGTGAGGGATAAGAGGT
GCATTTATTTATGGATAATATGCTATTACATCA

Query= MSMg01no148_m18.b1 MSMg01no148_m18.b1 CHROMAT_FILE:
MSMg01no148_m18.b1 PHD_FILE: MSMg01no148_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:48 2005
         (627 letters)



>mm_chr5_142091264_142092290
          Length = 1027

 Score = 1141 bits (590), Expect = 0.0
 Identities = 617/630 (97%), Gaps = 11/630 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattca-cccaaagtgcc-cacgaaaccgagcacagatcaagaacttgcagtgactttc 61
           ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcaacccaaagtgcagcacgaaaccgagcacagatcaagaacttgcagtgactttc 262

                                                                       
Query: 62  agccttggcacatgaggttccttcctggagaccttttctgtgggagctacaagcctccct 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agccttggcacatgaggttccttcctggagaccttttctgtgggagctacaagcctccct 322

                                                                       
Query: 122 ctctttataacattatcttatgacctttaaattttgacctttgggcttctaacaaagtgg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctctttataacattatcttatgacctttaaattttgacctttgggcttctaacaaagtgg 382

                                                                       
Query: 182 attttttttctcttaaaaagatacagtaaccctaatgtttccaaacttgaagaattagtt 241
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attttttt-ctcttaaaaagatacagtaaccctaatgtttccaaacttgaagaattagtt 441

                                                                       
Query: 242 aaatagcctattaataatcctagcagctattatttattgaggacctacttgaaacatatc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatagcctattaataatcctagcagctattatttattgaggacctacttgaaacatatc 501

                                                                       
Query: 302 ttctgtaatcctcagaattgccttctggggcacttataattagctccacttacagctatc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttctgtaatcctcagaattgccttctggggcacttataattagctccacttacagctatc 561

                                                                       
Query: 362 agaactgaacccc----acagatactaactcaccctggggcatgcagctgacaggccgcc 417
           |||||||||        | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agaactgaa----gtttagagatactaactcaccctggggcatgcagctgacaggccgcc 617

                                                                       
Query: 418 gcagcaggactgaggcctggttctgactccagagcccacgctcgcctctcgtcaagctga 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcagcaggactgaggcctggttctgactccagagcccacgctcgcctctcgtcaagctga 677

                                                                       
Query: 478 gtctcctgttccagttacttgatgagctcgcctcctgcttttgatcattgctcccatggc 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtctcctgttccagttacttgatgagctcgcctcctgcttttgatcattgctcccatggc 737

                                                                       
Query: 538 ttcaggtggttttgctcatttatttagaagcccagctttcaatttgaaataacacgggct 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttcaggtggttttgctcatttatttagaagcccagctttcaatttgaaataacacgggct 797

                                         
Query: 598 tgtgtgggtttgggtagaggtagggagaag 627
           ||||||||||||||||||||||||||||||
Sbjct: 798 tgtgtgggtttgggtagaggtagggagaag 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)