Query= MSMg01no149_e03.b1 MSMg01no149_e03.b1 CHROMAT_FILE:
MSMg01no149_e03.b1 PHD_FILE: MSMg01no149_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:28 2005
(420 letters)
>mm_chr5_106517872_106518691
Length = 820
Score = 766 bits (396), Expect = 0.0
Identities = 414/420 (98%)
Strand = Plus / Plus
Query: 1 caggcttgctttctttgatttcatctttgctttccttataagtttgccgtccatcctggg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 201 caggcttgctttctttgatttcatctttgctttccttataagtctgccgtccatcctagg 260
Query: 61 cccatttcgtcaaagtctactatggttgtaatcataccttccaatgctctgttaccaaat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccatttcatcaaagtctactatggttgtaatcataccttccaatgctctgttaccaaat 320
Query: 121 gcaatgctccgagactttttttcttagaaattcaaaagaaagataagttttacaagtctt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaatgctccgagacttcttttcttagaaattcaaaagaaagataagttttacaagtctt 380
Query: 181 tacatctctcgtaacacagtgatcgaaaacccagacttatcaagtatagaaaacccatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacatctctcgtaacacagtgatcgaaaacccagacttatcaagtatagaaaacccatat 440
Query: 241 tattgacacggttcatttgctaccgtttaatgctctcttacatgtggtgagtgtaacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattgacacggttcatttgctaccgtttaatgctctcttacatgtggtgagtgtaacagg 500
Query: 301 attttgttctcgggctgtttatttttatgactgctcagtaaatagcatccttattttatt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 attttgttctcgggctgtttatttttatgactgttcagtaaatagcatccttattttatt 560
Query: 361 ttcgctctctgggtaggcgaggccctttgctttggtaaatttcactcctcgaactgtgcc 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcgctctctgggtaggctaggccctttgctttggtaaatttcactcctcgaactgtgcc 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_e03.g1 MSMg01no149_e03.g1 CHROMAT_FILE:
MSMg01no149_e03.g1 PHD_FILE: MSMg01no149_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:28 2005
(441 letters)
>mm_chr5_106619723_106620563
Length = 841
Score = 716 bits (370), Expect = 0.0
Identities = 408/426 (95%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 1 gtaccgaaacatgctccaccagtcggctggctctgtaagggctgctgggtctctcttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtaccgaaacatgctccaccagtcggctggctctgtaagggctgctgggtctctcttgac 367
Query: 61 tttgctctgtccctacctatgggaacatgtcagtccttaacatgcttgagacttacccag 120
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 366 tttgctctgtccctacctatggggacatctcagtccttaacatgcttgagacttacccag 307
Query: 121 gattgtccttcagaagcaaagttagacatggtcagtcgatctgaaagtacatccttgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gattgtccttcagaagcaaagttagacatggtcagtcgatctgaaagtacatccttgcct 247
Query: 181 tctgcaccccagcagccgttctgggaccaagggtggtgatgctgca---------tccaa 231
|||||| |||||||||||||||||| ||| || ||||| ||||||| |||||
Sbjct: 246 tctgcatcccagcagccgttctggggccacggatggtggtgctgcaagggtcgcatccaa 187
Query: 232 gtaatgtatgatgtacactcaccatacaaaatatgagggtccgcaaatcaacaccacacg 291
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 186 gtaatgtataatgtacactcaccacacaaaatatgagggtccgcaaatcaacaccacacg 127
Query: 292 tcagaacccttccgagccaagaatgtgtttatttctcacagctgctgtagcaaacaagga 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tcagaacccttccgagccaagaatgtgtttatttctcacagctgctgtagcaaacaagga 67
Query: 352 caaactgcatggcttcatataacacatgtgttttctactgtagtttcaaaggccaagagt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 caaactgcatggcttcatataacacatgtgttttctactgtagtttcaaaggccaagagt 7
Query: 412 ccacaa 417
||||||
Sbjct: 6 ccacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
