Query= MSMg01no149_e21.b1 MSMg01no149_e21.b1 CHROMAT_FILE:
MSMg01no149_e21.b1 PHD_FILE: MSMg01no149_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:31 2005
(621 letters)
>mm_chr5_46634453_46635475
Length = 1023
Score = 1118 bits (578), Expect = 0.0
Identities = 608/618 (98%), Gaps = 2/618 (0%)
Strand = Plus / Plus
Query: 6 gaattcaaactactatcacaaaa-aagagaaag-atccatgcagcccactctgctgctgc 63
||||||||||||||| || |||| ||||| ||| ||||||||||||||||||||||||||
Sbjct: 206 gaattcaaactactaccagaaaacaagaggaagtatccatgcagcccactctgctgctgc 265
Query: 64 attgagaccttccaggttggcattctctctttccatcctagtgttttgacttgattgctg 123
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttgagaccttccaggttggcgttctctctttccatcctagtgttttgacttgattgctg 325
Query: 124 aatcctccattttctcctcattttctttcctttttcttcactttccttcctcttgtcttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aatcctccattttctcctcattttctttcctttttcttcactttccttcctcttgtcttt 385
Query: 184 cattttctcttctaattgtcttccccctcttccttctgctattctatttctccattcacg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cattttctcttctaattgtcttccccctcttccttctgctattctatttctccattcacg 445
Query: 244 tccttttcttttcatctttctttctttattccctccttgttttcttgttttagaagttaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tccttttcttttcatctttctttctttattccctccttgttttcttgttttagaagttaa 505
Query: 304 gaggcgacccaggcctgatctggggcacaagtcccctccactcgactcgagccccgggct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaggcgacccaggcctgatctggggcacaagtcccctccactcgactcgagccccgggct 565
Query: 364 accttgccagcagagtcttgcccaacacccgcaagggcccacacgggaccccccacggga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 accttgccagcagagtcttgcccaacacccgcaagggcccacacgggaccccccacggga 625
Query: 424 tcctaagacctctggtgagtggaacacagcgcctgccccaatccaatcgcgcggaacctg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tcctaagacctctggtgagtggaacacagcgcctgccccaatccaatcgcgcggaacctg 685
Query: 484 agactgcggtacatagggaagcaggctacccgggcttgatctggggcacaaaccccttcg 543
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agactgctgtacatagggaagcaggctacccgggcttgatctggggcacaaaccccttcg 745
Query: 544 gctccactcgagccccgggctacctttccagcggagtcgcctgacacccgccagggccca 603
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 746 gctccactcgagccccgggctacctttccagcggagttgcctgacacccaccagggccca 805
Query: 604 cacaggattccacaggag 621
||||||||||||||||||
Sbjct: 806 cacaggattccacaggag 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1023
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1013
Effective search space: 618943
Effective search space used: 618943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_e21.g1 MSMg01no149_e21.g1 CHROMAT_FILE:
MSMg01no149_e21.g1 PHD_FILE: MSMg01no149_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:31 2005
(641 letters)
>mm_chr5_46727019_46728059
Length = 1041
Score = 609 bits (315), Expect = e-178
Identities = 327/331 (98%)
Strand = Plus / Minus
Query: 311 tggatatgacatggctgctgtactcaagatctcatggcagctgtggttacctgtaaaaga 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 tggatatgacatggctgctgtactcaagatctcatggcagctgtggttacctgtaaaaga 982
Query: 371 ttttcacaagatcaagccagtagaaaattccaacatagagctgggtgggatctcaaggcc 430
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 981 gtttcacaagatcaagccagtagaaaattccaacatagaactgggtgggatctcaaggcc 922
Query: 431 cctcttctaggtgactagtgattggcagttggtggctactgtgggaggggggtcaccttt 490
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 921 cctcttctaggtgactagtgattggcagttggtggctactgtgggaggggggtcacattt 862
Query: 491 ctatgggaaatggctactggccccagaactctggcacatagggagctctgatggcacttg 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ctatgggaaatggctactggccccagaactctggcacatagggagctctgatggcacttg 802
Query: 551 atgagtcagaaagaaaaatggacatgaaattagaaggatgatggtaaggagtaaagacag 610
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 801 atgagtcagaaagaaaaatggacatgaaattagaaggatgatggtagggagtaaagacag 742
Query: 611 atacaatcaaaataatgtacatataaatgtc 641
|||||||||||||||||||||||||||||||
Sbjct: 741 atacaatcaaaataatgtacatataaatgtc 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
