TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGCGATT
CTCTGCTTACATATACCCCATTTTTTTTGATTGGGTTGTTTGGTTTTTTT
GATTGTTAGGTTCTTGAGTTTGTTATATATGTTGNACCTCCCACTCATTG
NCACAGGCCATAAATTTCCTAAACATGCTCAATGGAACCTCATCGAGGCC
AAGGGATGATGGACAGGAAAGATGTGTGCTAAAAACATTTCGCAGTTTTA
ACTGCATTACCCCCCATTATTCGAAACCTCTCGGCCCTCGCATGATTATC
CCTAACCACCCCTTTTTTTTCACCCACACCTAATACCCCTTCCTCATCCT
TCCCCAAAGACAGGTCTCTCCCCTCCTCCACCACACCACTCCCTCCTAAA
CCCCACCCTATTTTCCCTATTGTGTACCCCCCCCCCTCATAATTACCAAC
CAATCTCCTCCCTTCTTCCCCCATTTATCCCTCCACATTACCACCTCCTC
CCTTTCCCCCCTCTCCCCCCTCACACCACTCCCTCCACCCCCCCCCCCTA
ATATCCCCTCACTACCTTCCCAATCCTTCCTTCCCCCCCCCATCTTTATA
CTCCTCCCCTCAATACCTCTATAACAACCCCCCCTCTTCTCCTCCCGCCC
CCCACCCACCCATCATTGTAAATTCACTTTCCCCGCTCCACCCTTGCCGC
ACGCCCACACAACCCCCTTCCCCTCCGCTTCCTCCTTTCTCCCCCCTTTT
TTCTTCCGGTCCGACATTCACCCTCTATCTCCTACTGCCCCCATTACACG
CTTGCCCTCCTCCCTCCCCCTCCCCCCCTTTTTACCCTTT

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAAAAAAAAACTGTGTATAAAATATAG
TTATATTATGCTCTTTCTATGTAGTTTTAACTTCAGATATTTCTAATATT
AATATTCCAGATGTTTTGTCAATAATATATAAGACATATTGAAGATATTT
AAAGGATAATTATATATATATATATATATGTATATAACTTAGAACTGGGC
CCCTTAATGTTTTCATTCTTCTCTTTAAAGTTTTAGTCTATTACTATATT
TTTATGAAACAGTTCAAAATTTAGTAAAATACGTGATAAGTGTGTTTCTT
TCCTATATGACTCATGACATCAGTTTCATTTACTTATTTATTTTTCATGT
GCAGACTTTTAGAATTGCTCTTTAAAATAAGGAAATATGAATCTTGCAGA
ACAGAATTATCTGTGATAAGAAAATAAAGGCAATGTCTTTAAAACACCTA
AAAATGGGATTAAATAGGTCCATTCCAACATATATATATATATATATATA
TGTATATGTATATGCATATATATATATAACAAATATATATTTTTTACAAG
TTAGATCAATAATAAGCAACATTAATTAATTAATTAAGTTGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGTTTAAAGCTTGATAGTAGGTTGCTCTA
TAGGTAGATAATGTATACACTGGTCCCCAATTTTCATTC

Query= MSMg01no151_p02.g1 MSMg01no151_p02.g1 CHROMAT_FILE:
MSMg01no151_p02.g1 PHD_FILE: MSMg01no151_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:54 2005
         (603 letters)



>mm_chr5_56610219_56611221
          Length = 1003

 Score =  988 bits (511), Expect = 0.0
 Identities = 575/629 (91%), Gaps = 52/629 (8%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaaaaaaaactgtgtataaaatatagttatattatgctctttctatgtagttttaacttc 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaaaaaaaactgtgtataaaatatagttatattatgctctttctatgtagttttaacttc 261

                                                                       
Query: 62  agatatttctaatattaatattccagatgttttgtcaataatatataagacatattgaag 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agatatttctaatattaatattccagatgttttgtcaataatatataagacatattgaag 321

                                                                       
Query: 122 atatttaaaggataattatatatatatatatatatgtatataacttagaactgggcccct 181
           ||||||||||||||||      ||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atatttaaaggataat------tatatatatatatgtatataacttagaactgggcccct 375

                                                                       
Query: 182 taatgttttcattcttctctttaaagttttagtctattactatatttttatgaaacagtt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taatgttttcattcttctctttaaagttttagtctattactatatttttatgaaacagtt 435

                                                                       
Query: 242 caaaatttagtaaaatacgtgataagtgtgtttctttcctatatgactcatgacatcagt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 caaaatttagtaaaatacgtgataagtgtgtttctttcctatatgactcatgacatcagt 495

                                                                       
Query: 302 ttcatttacttatttatttttcatgtgcagacttttagaattgctctttaaaataaggaa 361
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 496 ttcatttacttatttatttttcatgtgcagacttttagaattgttctttaaaataaggaa 555

                                                                       
Query: 362 atatgaatcttgcagaacagaattatctgtgataagaaaataaaggcaatgtctttaaaa 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atatgaatcttgcagaacagaattatctgtgataagaaaataaaggcaatgtctttaaaa 615

                                                                       
Query: 422 cacctaaaaatgggattaaataggtccattccaacatatatatatatatatat------- 474
           |||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct: 616 cacctaaaaatgggattaaataggtccattccaacatatatatatatatatatgtatgta 675

                                                                       
Query: 475 -------------------------------------atatgtatatgtatatgcatata 497
                                                |||||||||||||||||||||||
Sbjct: 676 tatgtatatatatatatatgtatgtatatgtatatatatatgtatatgtatatgcatata 735

                                                                       
Query: 498 tatatata--acaaatatatattttttacaagttagatcaataataagcaacattaatta 555
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tatatatataacaaatatatattttttacaagttagatcaataataagcaacattaatta 795

                                        
Query: 556 attaattaagttgagagagagagagagag 584
           ||||||||||||||||||||||| |||||
Sbjct: 796 attaattaagttgagagagagagggagag 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 99
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)