XXXXXXXXXXXXXXXXXXXXXXXTTCAAAAGAGGATCCGCGGAATTCACA
CGTTTCTTACATTGGAAGACTGAGCTATCTCAAGGATCATTTTTGTTGTG
TGGGTTGGAGACTTCAGGACTTCTTGGTTTTCTTTAATCCCATGCTTTGT
TTTGGTTTTGATATACTTGATAGGTCTCCCCAAATATAGATATAATAAAT
TATTTAATTATTGTGTAAGAGTTTAAAACAACTGATATCTTTGAAATCTC
TTGTTAAAACATTTGTGTCTAAGAATAACGGTTGCATGAATTCTCTCAGA
ATTAGAGAAAAGCTATTAATTCTTACTCTATTAGACTTTTTACTCATAAC
AGATCTTTTTGATAAACATTTTAGCATTATACTATTATGATAAATCCAAT
AATAATTATACTTACTATTATTATATAAAATCCTTGTTTTTTTAAAGTGT
AAATGATTTTACGTTCTAGGCATGCTTTGATTTCCCAACTTTGTTCCTCC
TACATGTGTGATTATTCTTCAATTTGCAAATAAAGAAAAGTCTGTCTGGT
TGCACATCGGATGATTCTGTTACTTATGGTCTAACTAGTTTGTTTATCTT
TATTACATATATTTTCTATAGTTTAGATAAGCCTTAATAGCAATGACACT
TATTTAACTCTCTCTTCTCCTACTCGTGTTTTTCTACATATGCAG

GAGGGGCGGGAGCGGATTCTGAATCCGGACCCCCTTAATATNCTATATGC
ATGATATGTGTAGCCTGGCGGNCGCCTGGTTTCCAAAACCCCXXXXXXXX
XXXXXXXXXXXXXCCGACAACTCTTGGGCCCGGAAATGTCCAGAAGACTG
TGCGATTGCGAGCCACTAGATTACGCACATTTCTTTTGGGTAGCCCCGCC
CATGTCTAAGCTAGCCAATTACCCGCCTCGGCTGCCGCCCAAAGTTCGAA
TAGCATCGGCTCCCAGACGCCGGGCGGATCTGGTTCCCAATGAACAGTGC
GGAATAAACATCTGGCACTGGACTACATTCACTGTGGGAGGAAACGTAGT
CTGTGTTCCGAATCGCCAACCTAACCCGGACTCGATACCACCGGCCTTTT
TTTATCCACGTATTTTAACAAGATGGCAGTGTTCACCCTGGGGGACTGTT
TATTAAAACCAGCCCGATCCACATGTTAATAATGAATCCCTTATTTGACA
CAGAACGCTTGAGAGGCATCTTAATCCTTCAGCGTTAAGCTTTCGACGCC
GAACATGCCCCACTTTGATTTTAGGGCGACCGTTTAGGAGTGGCGCGTAC
ACTGAACCCTTCGCCCCTTCGGCCCATATTACTTCGCGCTATTCCCCCTA
AGAGTAATCCGTACAACTCTGGCAAAACACACCGGCCATACCACAACAAT
AAGAGCCGCCGCCCGCACGGGTGCAACAATGCCGCACACTTGTGGTCCCC
CCTATCGCGCGTCCCGACTTTTAACTCACCAACTCCCCAGACCCAAGATA
GGGGAAACCCGTGTAAATTACCCCCACACTTGTTTTCCCGCGCTTTCGTT
GCCATTGTTCGCGCAGCATCTTTTAGAAAAAGAGGTGAAACAACAACATC
CCCCGTTCCCCACTCCTGTCACTTG

Query= MSMg01no152_e16.b1 MSMg01no152_e16.b1 CHROMAT_FILE:
MSMg01no152_e16.b1 PHD_FILE: MSMg01no152_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:21 2005
         (523 letters)



>mm_chr5_82233459_82234382
          Length = 924

 Score =  951 bits (492), Expect = 0.0
 Identities = 516/524 (98%), Gaps = 1/524 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattggaagactgagctatctcaaggatcatttttgttgtgtgggttggagacttcagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 cattggaagactgagctatctcaaggatcatttttgttgtgtgggttggagacttcagga 818

                                                                       
Query: 61  cttcttggttttctttaatcccatgctttgttttggttttgatatacttgataggtctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cttcttggttttctttaatcccatgctttgttttggttttgatatacttgataggtctcc 758

                                                                       
Query: 121 ccaaatatagatataataaattatttaattattgtgtaagagtttaaaacaactgatatc 180
           ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 757 ccaaatatagacataataaattatttaatttttgtgtaagagtttaaaacaactgatatc 698

                                                                       
Query: 181 tttgaaatctcttgttaaaacatttgtgtctaagaataacggttgcatgaattctctcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tttgaaatctcttgttaaaacatttgtgtctaagaataacggttgcatgaattctctcag 638

                                                                       
Query: 241 aattagagaaaagctattaattcttactctattagactttttactcataacagatctttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aattagagaaaagctattaattcttactctattagactttttactcataacagatctttt 578

                                                                       
Query: 301 tgataaacattttagcattatactattatgataaatccaataataattatacttactatt 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 577 tgataaacattttagcattatactattatgataaagccaataataattatacttactatt 518

                                                                       
Query: 361 attatataaaatccttg-tttttttaaagtgtaaatgattttacgttctaggcatgcttt 419
           ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 517 attatataaaatccttgttttttttaaagtgtaaatgattttactttctaggcatgcttt 458

                                                                       
Query: 420 gatttcccaactttgttcctcctacatgtgtgattattcttcaatttgcaaataaagaaa 479
           |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gatttcacagttttgttcctcctacatgtgtgattattcttcaatttgcaaataaagaaa 398

                                                       
Query: 480 agtctgtctggttgcacatcggatgattctgttacttatggtct 523
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agtctgtctggttgcacatcggatgattctgttacttatggtct 354


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 924
Length adjustment: 10
Effective length of query: 513
Effective length of database: 914
Effective search space:   468882
Effective search space used:   468882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)