Query= MSMg01no155_h07.b1 MSMg01no155_h07.b1 CHROMAT_FILE:
MSMg01no155_h07.b1 PHD_FILE: MSMg01no155_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:22 2005
(328 letters)
>mm_chr5_142308497_142309224
Length = 728
Score = 596 bits (308), Expect = e-175
Identities = 320/324 (98%)
Strand = Plus / Plus
Query: 5 gaattctgtgttccctgtcaaggaccaacgtgaagtgacaaaagcaacggttttccagca 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattctgtgttccctgtcaaggaccaacgtgaagtgacgaaagcaacggttttccagca 264
Query: 65 ttgaagatctgaggaatttgctaactacacttgtgaactaatgagtaaatgatggttcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgaagatctgaggaatttgctaactacacttgtgaactaatgagtaaatgatggttcca 324
Query: 125 gtggagtgtgataagcagggaactctgaacatactccaaagagtgtttcctgttgacagg 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtggagtgtgatgagcagggaactctgaacatactccaaagagtgtttcctgttgacagg 384
Query: 185 gccagtgagagtgagggtccttgagcatcaccaagcagagatagataccgtgaggcccgg 244
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 385 gccagtgagagtgagggtccttgagcatcagcaagcagagatagataccgtgaggcccag 444
Query: 245 gaagacagcagtcaagtcgggagactgaagctggtaggacaatagacatttacatcccat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaagacagcagtcaagtcgggagactgaagctggtaggacaatagacatttacatcccat 504
Query: 305 gaaacctgataggacttacttcac 328
||||||||||||||||||||||||
Sbjct: 505 gaaacctgataggacttacttcac 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_h07.g1 MSMg01no155_h07.g1 CHROMAT_FILE:
MSMg01no155_h07.g1 PHD_FILE: MSMg01no155_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:22 2005
(279 letters)
>mm_chr5_142446840_142447518
Length = 679
Score = 497 bits (257), Expect = e-145
Identities = 270/279 (96%), Gaps = 8/279 (2%)
Strand = Plus / Minus
Query: 1 cactgcaaagacagtctcataatagaagctggtctgacacaacaaacatgaacttgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cactgcaaagacagtctcataatagaagctggtctgacacaacaaacatgaacttgaaaa 265
Query: 61 gcagcaggagtggccagtgctccaggtcactgtgtggacacagagtgatccccatcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcagcaggagtggccagtgctccaggtcactgtgtggacacagagtgatccccatcagca 205
Query: 121 gatgcacacacacacacacacacacacacacacacacacacacacacacacacacacaca 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gatg--------cacacacacacacacacacacacacacacacacacacacacacacaca 153
Query: 181 caaatcctcagaggcagtctttgccctggcttgccgtatgtacacaataagacccctagg 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 caaagcctcagaggcagtctttgccctggcttgccgtatgtacacaataagacccctagg 93
Query: 241 agctcacatatggctgtttgtttttttacatgtatttag 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 92 agctcacatatggctgtttgtttttttacatgtatttag 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
