Query= MSMg01no156_f12.b1 MSMg01no156_f12.b1 CHROMAT_FILE:
MSMg01no156_f12.b1 PHD_FILE: MSMg01no156_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:27 2005
(181 letters)
>mm_chr5_24471053_24471633
Length = 581
Score = 310 bits (160), Expect = 5e-89
Identities = 172/176 (97%)
Strand = Plus / Plus
Query: 5 gaattcacctgaacccctcaacacctccggtcctttgactcaggaccactttccctggcc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcacctgaacccctcaacacctccggtcctttgactcaggaccactttccctggtc 264
Query: 65 taagtattccccagcttagaagaggctgtcctgcataatcatgaaaggtgttacccctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 taagtattccccagcttagaagaggctgtcctgcataatcatgaaaggtgtcacccctca 324
Query: 125 attcagctctcccctcaccatactagaaacacagcatcttgaatttcaaagcccag 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtccagctctcccctcaccatactagaaacacagcatcttgaatttcaaagcccag 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no156_f12.g1 MSMg01no156_f12.g1 CHROMAT_FILE:
MSMg01no156_f12.g1 PHD_FILE: MSMg01no156_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:27 2005
(283 letters)
>mm_chr5_24619576_24620258
Length = 683
Score = 493 bits (255), Expect = e-144
Identities = 276/283 (97%), Gaps = 2/283 (0%)
Strand = Plus / Minus
Query: 1 ccaggcctagcatggagatgagccactctgccctgattaaaactaacccttgaagctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccaggcctagcatggagatgagccactctgccctgattaaaactaacccttgaagctccc 423
Query: 61 agcaccaaaggtgctgttgaaacattggctgcaaattgtttttgattgatacctgccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agcaccaaaggtgctgttgaaacattggctgcaaattgtttttgattgatacctgccata 363
Query: 121 ggtccttgtcgttcccttctgcgtgtggctgtcacgtggcgagaccttctactccatttg 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtccttgtagttcccttctgcgtgtggctgtcacgtggcgagaccttctactccatttg 303
Query: 181 ttctgttactgaaagctgctaagggacttgaggcatttgaggcctggatgttaaaatgtg 240
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 302 ttctgttactgagagctgctaagggacttgaggcatttggggcctggatgttaaaatgtg 243
Query: 241 gatata-tgcctacttccacccctaaaacccatctgctcccag 282
|| | | | ||||||||||||||||||||||||||||||||||
Sbjct: 242 gagacact-cctacttccacccctaaaacccatctgctcccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
