XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCC
CTGGGGTCTGGAGAGAAACAATAAATTCATGAAAGTTCTCTTTGAAAAAC
AGCAGTGACAAGAATTCTCTCTACAAGTGCATTCTCTACGGAGCACACAT
CCCTTTATTGCTAGACAAATATCTCACAACGCCTTAGAAACTTGTTTGTG
CTTATTACCTGTCCATAACAATACAATGCCTTGAAGAAATCTTATTCCTC
TTAACTAGATGAAGTATGATTTTAATTTTCCCGGTTTCAGTGAGTGGAAG
AGTACACCATAACACTAACCCTTTGGTCACTTGAAATCCTTCCATCAACT
CTTGATTTTCAGCCCACGCCCTATGCTTTCATCCATTCCGACTCCGCCGC
GATACATTCCAATCAGGAGATTTATTATTCTTTCCTGCTGTTTGGATTCC
TTAATCTATGAAAACGTCATACAAGTAGCAAAGAAAACCCTGCTGGTTTT
TGTGTGGTTATCGTTGCTAAGGAAACCATTCCCTTTCACTGCAGTGCATG
GGACATCTGTGCCACATTGAGCCTGCAACAGAGAAATGCATCATCTCAAA
CTCAGAAAGGAGGATGGAATGTAAAAGCACAAAATGGGGAAATTAATACA
AATAAAATTGCTTTTAAAAAACGTTCCCACTGCATGTTTTTGTTTTATTT
TTGTTAAAACTAAGGTGGTACCCCATGAACTCCTTAAAAAATGAAAAATC
TAAAA

TCTCTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTCCCATTNNNNTTA
ACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGTATGCCTAATCCTCACAC
TAACCCTGTAGAATCAGACCCTCATAGGACACAGCAATGCATCAGCCTCT
GTAATCCAGAGATACGGGCTGTTGTAGGCATGGCTGTTCCCCTGGTAGAA
TGAAGCCGAAGTCTTTCACCGATCAGAACTAATTGGCTAATTGATATGCT
TCAGACATCTTACTAAGCAAAAGACAGTTTAATTAAAACAAAATATTATC
CATAGCAGTGGGAGTTAAACTAATCTGAGATGAGAAATGAAGAGTCAGAA
CTGAAATGAACAGATTTTCTTCTACGCCCCTCTAACAATTATATTTATGG
GATGTTGCAACCTGTAGGCCGCCTGGTTACCTAAAACACAGAGTTGAGTT
TGGAAAAACAGACTACAATTAGGAATCCCTAAATCAATCTGCCAAATGAG
ATGGGCTAGGATGGACTGCTCATCAATGTTATGGAGACGAGCTTGACACT
GGTGAAAAAAGTTGTGTTCACAGCTATGTTTGTAATGACCAATAAAGTAA
ATTATTCATTTATAATAAAAAATATTAATTTTTGCTTTGAAAATAGAATC
TTAGTTCCTTTAGCTCACACTGGCATTCAATACTCATGGTTAGATATGTT
CACACTTTTATTTTCCCCCGATTACTTCTNATTTTCCCACACAATCAGGC
TTCACCCTATTAATTCGAAAATATCCAACCTTTCTATAAATTG

Query= MSMg01no156_g08.b1 MSMg01no156_g08.b1 CHROMAT_FILE:
MSMg01no156_g08.b1 PHD_FILE: MSMg01no156_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:31 2005
         (318 letters)



>mm_chr5_19646069_19646786
          Length = 718

 Score =  607 bits (314), Expect = e-178
 Identities = 314/314 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttccctggggtctggagagaaacaataaattcatgaaagttctctttgaaaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttccctggggtctggagagaaacaataaattcatgaaagttctctttgaaaaa 264

                                                                       
Query: 65  cagcagtgacaagaattctctctacaagtgcattctctacggagcacacatccctttatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcagtgacaagaattctctctacaagtgcattctctacggagcacacatccctttatt 324

                                                                       
Query: 125 gctagacaaatatctcacaacgccttagaaacttgtttgtgcttattacctgtccataac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctagacaaatatctcacaacgccttagaaacttgtttgtgcttattacctgtccataac 384

                                                                       
Query: 185 aatacaatgccttgaagaaatcttattcctcttaactagatgaagtatgattttaatttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatacaatgccttgaagaaatcttattcctcttaactagatgaagtatgattttaatttt 444

                                                                       
Query: 245 cccggtttcagtgagtggaagagtacaccataacactaaccctttggtcacttgaaatcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccggtttcagtgagtggaagagtacaccataacactaaccctttggtcacttgaaatcc 504

                         
Query: 305 ttccatcaactctt 318
           ||||||||||||||
Sbjct: 505 ttccatcaactctt 518


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space:   219081
Effective search space used:   219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no156_g08.g1 MSMg01no156_g08.g1 CHROMAT_FILE:
MSMg01no156_g08.g1 PHD_FILE: MSMg01no156_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:31 2005
         (285 letters)



>mm_chr5_19754964_19755648
          Length = 685

 Score =  536 bits (277), Expect = e-157
 Identities = 283/285 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ataagtatgcctaatcctcacactaaccctgtagaatcagaccctcataggacacagcaa 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 485 ataagtatgcctaatcctcacaataaccctgtagaatcagaccctcataggacacagcaa 426

                                                                       
Query: 61  tgcatcagcctctgtaatccagagatacgggctgttgtaggcatggctgttcccctggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgcatcagcctctgtaatccagagatacgggctgttgtaggcatggctgttcccctggta 366

                                                                       
Query: 121 gaatgaagccgaagtctttcaccgatcagaactaattggctaattgatatgcttcagaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaatgaagccgaagtctttcaccgatcagaactaattggctaattgatatgcttcagaca 306

                                                                       
Query: 181 tcttactaagcaaaagacagtttaattaaaacaaaatattatccatagcagtgggagtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcttactaagcaaaagacagtttaattaaaacaaaatattatccatagcagtgggagtta 246

                                                        
Query: 241 aactaatctgagatgagaaatgaagagtcagaactgaaatgaaca 285
           |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 245 aactaatcagagatgagaaatgaagagtcagaactgaaatgaaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space:   186576
Effective search space used:   186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)