TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCACAATCCTCCACATGGACGATTTATTATTACCATAACCTCAGGGTA
GTCTTAAATCAGTCATTGTTTTTCCCATGTTGCCATTCCCGCTTTTAAAA
TATAAATTGCTTGCTTTAAAACACCCTCAAACTTGATTCATTGAAGATTA
TCTGAGTACTATTGAAAACACGGAAGAGGTACACCACTTATAGCAGCCAT
TGTGCTAACCTGTAATTTTCCAGCATCTTTACATATACGTGGTATGGCAA
GCACAATCATCTAAACCCCTACTAATACGGCAGGCACACATACAACAAGC
CTCACTCCAAAATCTTTACTCCTGCACCCACGCCTCACTTAATGGCAGTA
GCATTCTAGACCAGAGCGCGCCATTCACTATCAAAGAACACACAACCCAC
GTTTTCCAGCCTTCTGGAACCCTGTTTAATAAACCACTTGCATGTAGCTC
ATACTAACATTTGCTTGGCTTAATGTTAGGTACTCTAGTGAGAGTTAAGA
CGTGTCTAAATGGCTTAAGCCCAAAAATATTGAGGCCACTAGCTCCAAAC
CTCTGAGTCAGAGGCACTGAGGCAAACCTAATACTTATGATAGCCATCTA
CAAAAAGATATGCACATGACTAANATTTACAACACAGGCCACATTTAGTA
ATTCTTTTTCTATTACATTAATTTGTGTGTGCACATGTGCATCTACATGA
GTA

GAAGTGGGAGGCCTGGCGGCGCCTGGCCTTCCCTATGGGGGAACTATAGA
AGGTTTGCCAAAAAAAGGACGCCAGGGCTATAAGAGAAACCCTGTCTCAA
AAAAGCAAATTTTCACACCAGAATGACAACTTGCAAGTAATGAACAACTT
GCAGTAATCAGTTCTTTCCTTCCACAGTGTGGGTCCCAACGGTTACCGGG
CTTGGCAGCAAGTGCTTTTACTCACTGAGCCATCTCAGTGTCCACCTTAC
TTGACTCGGAATAGAGATAGACTTGGTATCAATAAGTTTAGTAGCAGCTC
TGCCTGTAACATTACTCCTTTGAGGAATTATAGAACAATGACTACTGACA
ATTTATACTTTCCCCCCATCCCCCCTTTTATAGTACAAAGACAGTCTCTC
CAGATCCCCCAGATTTCCACAAAAACATCTGAGGTATAGGAAATGCCTTA
CAACACATGTTATTGTCTGTAAGACAAAGCTCCAACCTTTACTAAAATGG
TACACAAAGCAATTCTTTAAGTTATAGAGAGCTCAGATAGAACATAGAGT
AGAACTGTTATTTCATTTTCAGCAGGAAATGTAACTCGGTTGGGAGAGTG
CTCCTTAGTGTGCAAAAAGCCCGGAGTTCTTCCCCCAGCAACATGTAGTC
TGAGCTTGTTTTTTCACATCTGTAATTTCAGCAACTGGGATGCGAAGGCA
GGAGGGTCAGAAGTCAAGGTTATACTTTTTGACATAGAG

Query= MSMg01no159_c21.b1 MSMg01no159_c21.b1 CHROMAT_FILE:
MSMg01no159_c21.b1 PHD_FILE: MSMg01no159_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:51 2005
         (323 letters)



>mm_chr5_132934377_132935099
          Length = 723

 Score =  569 bits (294), Expect = e-166
 Identities = 312/318 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcacaatcctccacatggacgatttattattaccataacctcagggtagtctta 64
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcacaatcctccagatggacgatttattattaccataacctcagggtagtctta 264

                                                                       
Query: 65  aatcagtcattgtttttcccatgttgccattcccgcttttaaaatataaattgcttgctt 124
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatcagtcattgtttttgcaatgttgccattcccgcttttaaaatataaattgcttgctt 324

                                                                       
Query: 125 taaaacaccctcaaacttgattcattgaagattatctgagtactattgaaaacacggaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaaacaccctcaaacttgattcattgaagattatctgagtactattgaaaacacggaag 384

                                                                       
Query: 185 aggtacaccacttatagcagccattgtgctaacctgtaattttccagcatctttacatat 244
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtacaccacttatagtagccattgtgctaacctgtaattttccagcatctttacatat 444

                                                                       
Query: 245 acgtggtatggcaagcacaatcatctaaacccctactaatacggcaggcacacatacaac 304
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 445 acgtggtatggcaagcacaatcatctaaacccctactaatatggcaggcacacaaacaac 504

                             
Query: 305 aagcctcactccaaaatc 322
           ||||||||||||||||||
Sbjct: 505 aagcctcactccaaaatc 522


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no159_c21.g1 MSMg01no159_c21.g1 CHROMAT_FILE:
MSMg01no159_c21.g1 PHD_FILE: MSMg01no159_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:51 2005
         (229 letters)



>mm_chr5_133090025_133090653
          Length = 629

 Score =  435 bits (225), Expect = e-127
 Identities = 228/229 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgaggtataggaaatgccttacaacacatgttattgtctgtaagacaaagctccaacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctgaggtataggaaatgccttacaacacatgttattgtctgtaagacaaagctccaacct 370

                                                                       
Query: 61  ttactaaaatggtacacaaagcaattctttaagttatagagagctcagatagaacataga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 369 ttactaaaatggtacacaaagcaattctttaagttatagagagctcagatagaacatagt 310

                                                                       
Query: 121 gtagaactgttatttcattttcagcaggaaatgtaactcggttgggagagtgctccttag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtagaactgttatttcattttcagcaggaaatgtaactcggttgggagagtgctccttag 250

                                                            
Query: 181 tgtgcaaaaagcccggagttcttcccccagcaacatgtagtctgagctt 229
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgtgcaaaaagcccggagttcttcccccagcaacatgtagtctgagctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space:   136400
Effective search space used:   136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)