Query= MSMg01no162_k03.b1 MSMg01no162_k03.b1 CHROMAT_FILE:
MSMg01no162_k03.b1 PHD_FILE: MSMg01no162_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:03 2005
(671 letters)
>mm_chr5_151114118_151115187
Length = 1070
Score = 1174 bits (607), Expect = 0.0
Identities = 652/667 (97%), Gaps = 1/667 (0%)
Strand = Plus / Minus
Query: 5 gaattctatacccttccgaactatcaccagagactgagtggggacactgagctgagaaac 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gaattctatacccagctgaactatcaccagagactgagtggggacactgagctgagaaac 811
Query: 65 actgatccttccctttgacttttatgctataagataaaaatataaaaatgacaaagatga 124
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ac-gagccttccctttgacttttatgctataagataaaaatataaaaatgacaaagatga 752
Query: 125 cctcacttagcttgcttagcacacaagaaagacaaaccaagataacaatgaataagaaca 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cctcacttagcttgcttagcgcacaagaaagacaaaccaagataacaatgaataagaaca 692
Query: 185 taggcaattaaatgtccccatgaagcattagaaaataggataaaattattgatttttcca 244
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 691 taggcaattaaatgtccccacgaagcattagaaaataggataaaattattgacttttcca 632
Query: 245 tcaatatcaatgactctgacttgagcatcttttggggacaaatagaaatactgctgaaca 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 631 tcaatatcaatgactctgacttgagcatcttttgggtacaaatagaaatactgctgaaca 572
Query: 305 actgaaagatgtttataaaaatattgatgaaaactgaaatctgatttttgtaggacattc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 actgaaagatgtttataaaaatattgatgaaaactgaaatctgatttttgtaggacattc 512
Query: 365 ttactgtccatcatttttcctccactaaggatagatctctgggtactgaaaagtcatcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttactgtccatcatttttcctccactaaggatagatctctgggtactgaaaagtcatcta 452
Query: 425 tagaattttaaactttaatgtgccatggtacaggttctattgttcacagtctattgaaca 484
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 451 tagaattttaaactttaatgtgccatggtgcaggttctattgttcaccgtctattgaaca 392
Query: 485 gttacagtagcagccacactcttccttgggtatcatcagaattgctttttcctccttctg 544
|||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct: 391 gttacagtagcagccacactctcccttgggtatcatcagaattactttttccttcttctg 332
Query: 545 tttctccttctgcaaggttctcttctctccctaaggctttagataggattatatcccatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tttctccttctgcaaggttctcttctctccctaaggctttagataggattatatcccatg 272
Query: 605 cctttcatccatcaatctatatgtgaaatagaaataacaccacattgaccaaggtattaa 664
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 271 cctttcatccatcaatctatatgtgaaatagaaataacaccacattgaccaatgtattaa 212
Query: 665 acagagc 671
|||||||
Sbjct: 211 acagagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1070
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1060
Effective search space: 700660
Effective search space used: 700660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_k03.g1 MSMg01no162_k03.g1 CHROMAT_FILE:
MSMg01no162_k03.g1 PHD_FILE: MSMg01no162_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:03 2005
(183 letters)
>mm_chr5_150970758_150971340
Length = 583
Score = 294 bits (152), Expect = 2e-84
Identities = 173/182 (95%), Gaps = 5/182 (2%)
Strand = Plus / Plus
Query: 1 aagtcagttctaaatccatgccaattaaaggagcaacttttcattcctgaggcgtgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcagttctaaatccatgccaattaaaggagcaacttttcattcctgaggcgtgaaac 260
Query: 61 caggctaatggcactttggacagtaaatcttctttatttagagataaggtctcagccttc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 caggctaatggcactttggacagtaaatcttctttatttagagatagggtctcagccttc 320
Query: 121 ctcagtatttacagtagtgtgcatgtgttttgtgtgtatgtgtgtgtgtgtgtgtgtgtg 180
||||| | ||||||||||||| ||||| |||||| ||||||||||||||||||||||
Sbjct: 321 ctcaggaattacagtagtgtg--tgtgt---gtgtgtgtgtgtgtgtgtgtgtgtgtgtg 375
Query: 181 tg 182
||
Sbjct: 376 tg 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
