Query= MSMg01no165_e08.b1 MSMg01no165_e08.b1 CHROMAT_FILE:
MSMg01no165_e08.b1 PHD_FILE: MSMg01no165_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:21 2005
(684 letters)
>mm_chr5_52405242_52406324
Length = 1083
Score = 1274 bits (659), Expect = 0.0
Identities = 674/679 (99%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcacagcccacgtcccagcatcataaaaagctgtactcttgggtgttcttctc 64
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcctcacagccca-gtcccagcatcataaaaagctgcactcttgggtgttcttctc 263
Query: 65 agtacctgctctttctgaagtgcactgacctcagagatgggctgtaaccagctttagtct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agtacctgctctttctgaagtgcactgacctcagagatgggctgtaaccagctttagtct 323
Query: 125 taggaatggtgcatctcctccctctcattttgtcaccccctcccccaccccaaatcataa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taggaatggtgcatctcctccctctcattttgtcaccccctcccccaccccaaatcataa 383
Query: 185 gtttcaggctccagcatcaccttcatcacccagccctacgcccaaggcccagaaaatgac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtttcaggctccagcatcaccttcatcacccagccctacgcccaaggcccagaaaatgac 443
Query: 245 caaacgaataatgaattcattaggagatcagagttctgtccttggggtcagagaaaaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaacgaataatgaattcattaggagatcagagttctgtccttggggtcagagaaaaaag 503
Query: 305 taaagacactttacattcgttttgtttaaaataagatgcagggagagatgaaatgagtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaagacactttacattcgttttgtttaaaataagatgcagggagagatgaaatgagtaa 563
Query: 365 tgctctttgccgctgactaaagtccacagccaagaagtagccaaggataagcctcattgc 424
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgctctttgttgctgactaaagtccacagccaagaagtagccaaggataagcctcattgc 623
Query: 425 cttaaagtggataaaagcatttgctggcccactctccccactttccgaaaacgactgaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttaaagtggataaaagcatttgctggcccactctccccactttccgaaaacgactgaga 683
Query: 485 tcttgcctctaactttccaagaaacaactggaggttgttcatccaaatggccccactggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcttgcctctaactttccaagaaacaactggaggttgttcatccaaatggccccactggt 743
Query: 545 ctccattcattgatagtcggacacgattaactcagcttccacagaatcctggttgcacag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctccattcattgatagtcggacacgattaactcagcttccacagaatcctggttgcacag 803
Query: 605 cactgtgcccttccccatttgtgttataagaacaatccagtgcacaatacccctccttct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cactgtgcccttccccatttgtgttataagaacaatccagtgcacaatacccctccttct 863
Query: 665 aggaggtgaaagaaagggt 683
|||||||||||||| ||||
Sbjct: 864 aggaggtgaaagaaggggt 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1083
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1073
Effective search space: 723202
Effective search space used: 723202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_e08.g1 MSMg01no165_e08.g1 CHROMAT_FILE:
MSMg01no165_e08.g1 PHD_FILE: MSMg01no165_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:22 2005
(159 letters)
>mm_chr5_52566594_52567153
Length = 560
Score = 302 bits (156), Expect = 8e-87
Identities = 159/160 (99%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 1 tagaattaggttgacttttatcagtgtaagctaacttgattatctacttatttctaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tagaattaggttgacttttatcagtgtaagctaacttgattatctacttatttctaatat 301
Query: 61 ttatgcacttgc-aaaaaaacacttgtagaaggctcgctttgaagacttgctttgtttgc 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttatgcacttgcaaaaaaaacacttgtagaaggctcgctttgaagacttgctttgtttgc 241
Query: 120 acagctactgttggagaaaatactggatagaaagtacaac 159
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acagctactgttggagaaaatactggatagaaagtacaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 560
Length adjustment: 8
Effective length of query: 151
Effective length of database: 552
Effective search space: 83352
Effective search space used: 83352
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
