Query= MSMg01no166_b08.b1 MSMg01no166_b08.b1 CHROMAT_FILE:
MSMg01no166_b08.b1 PHD_FILE: MSMg01no166_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:29 2005
(283 letters)
>mm_chr5_77924190_77924871
Length = 682
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%), Gaps = 1/280 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaccttgatgatatcggtagcgtaggttagtccagctagccagcaagctccaaa 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggaattcaccttgatgatat-ggtagcgtaggttagtccagctagccagcaagctccaaa 424
Query: 64 gatttacctatctgtgcctccacagcactggaattataaactttgtatcacacccagttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gatttacctatctgtgcctccacagcactggaattataaactttgtatcacacccagttt 364
Query: 124 tttatgtggatcctgggaatgggacttacaatctcatccttaggattgtggcatttgttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttatgtggatcctgggaatgggacttacaatctcatccttaggattgtggcatttgttt 304
Query: 184 gtttgtctttacttgtggtaagccaggaagaaggaagagaggacaaaaggaaagaaggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtttgtctttacttgtggtaagccaggaagaaggaagagaggacaaaaggaaagaaggaa 244
Query: 244 atgaagttggatgaacaggtaagtaggggaggatctagga 283
||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgaagttggatgaacaggtaagtaggggaggatctagga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_b08.g1 MSMg01no166_b08.g1 CHROMAT_FILE:
MSMg01no166_b08.g1 PHD_FILE: MSMg01no166_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:29 2005
(169 letters)
>mm_chr5_77775558_77776126
Length = 569
Score = 290 bits (150), Expect = 3e-83
Identities = 159/162 (98%)
Strand = Plus / Plus
Query: 1 atggcaacctcctgcttcagcctcctacaggagagtaggctcactgcaggcctcactttc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 atggcaacctcctgcttcagcctcctacaggagaggaggctcactgcaggcctcactttc 260
Query: 61 aggcctgcaccactgtgcttggtgatttgtaatttcttttttctttttcctattttctca 120
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aggcctgcaccactgggcttggtgatttgtaatttcttttttctttttcctaatttctca 320
Query: 121 atatggaggaagggaaggaggggaagacaggaagagagagag 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatggaggaagggaaggaggggaagacaggaagagagagag 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
