Query= MSMg01no166_l06.b1 MSMg01no166_l06.b1 CHROMAT_FILE:
MSMg01no166_l06.b1 PHD_FILE: MSMg01no166_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:17 2005
(334 letters)
>mm_chr5_123636636_123637369
Length = 734
Score = 600 bits (310), Expect = e-176
Identities = 325/330 (98%)
Strand = Plus / Plus
Query: 5 gaattctatagagtaccccacttgtcaaggactttgagctgcttggcagctatctcccct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatagagtacaaaacttgtcaaggactttgagctgcttggcagctatctcccct 264
Query: 65 ggcatcttgggcttggtgtctcctctctctccttctgggcacacctgattaatctttctg 124
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcatctcaggcttggtgtctcctctctctccttctgggcacacctgattaatctttctg 324
Query: 125 attctgtaacaaatcatattcatgtgatttttcatcctaattcacatgacttgacagttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attctgtaacaaatcatattcatgtgatttttcatcctaattcacatgacttgacagttt 384
Query: 185 tataaataaggctttcagggagtgtcatattgatggaaacataatttcacgggttgaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tataaataaggctttcagggagtgtcatattgatggaaacataatttcacgggttgaaat 444
Query: 245 tcagtcttttcagaacacaggtctgtgaactttgaaaacacattacagttattgtcgact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagtcttttcagaacacaggtctgtgaactttgaaaacacattacagttattgtcgact 504
Query: 305 ttcaccgacctgtacagatcttgtctacca 334
||||||||||||||||||||||||||||||
Sbjct: 505 ttcaccgacctgtacagatcttgtctacca 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_l06.g1 MSMg01no166_l06.g1 CHROMAT_FILE:
MSMg01no166_l06.g1 PHD_FILE: MSMg01no166_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:17 2005
(238 letters)
>mm_chr5_123756997_123757631
Length = 635
Score = 420 bits (217), Expect = e-122
Identities = 231/237 (97%), Gaps = 3/237 (1%)
Strand = Plus / Minus
Query: 1 tttgcgggagtcttgtattcttgtgaaatcagaccttgattactgcattacctttgaacc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 434 tttgcgggagtcttgtattcttgtgaaatcagacctcgattactgcattacctttgaacc 375
Query: 61 ctgcagtggctatatttgtgtgtgagcccaagctggctaggccaacttgtccataggact 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgcagtggctatattcgtgtgtgagcccaagctggctaggccaacttgtccataggact 315
Query: 121 ccttagggaagcagaggggaggggtgaaggcacagcagggagggggatggcggcacagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccttagggaagcagaggggaggggtgaaggcacagcagggagggggatggcggcacagtt 255
Query: 181 atgttctcatgggaagtgcttcatgaacctcagcagagacgacgggggtggggggtg 237
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 254 atgttctcatgggaagtgtttcatgaacctcagcagagacg---ggggtggggggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 635
Length adjustment: 9
Effective length of query: 229
Effective length of database: 626
Effective search space: 143354
Effective search space used: 143354
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
