Query= MSMg01no170_i11.b1 MSMg01no170_i11.b1 CHROMAT_FILE:
MSMg01no170_i11.b1 PHD_FILE: MSMg01no170_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:30 2005
(189 letters)
>mm_chr5_92565355_92565942
Length = 588
Score = 354 bits (183), Expect = e-102
Identities = 186/187 (99%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 1 ggcttaaggaactagcaggaatctgccccacaaagaggggaaagggcatactaaagcaag 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ggcttaaggaactagcaggaatctgccccacaaagaggg-aaagggcatactaaagcaag 259
Query: 61 agaaacatgttgagtatttgagggacactggcgcttcaaccctaacaggtgtgtctgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaaacatgttgagtatttgagggacactggcgcttcaaccctaacaggtgtgtctgcca 319
Query: 121 aactaaggagtttggatgtcattatataaaccggggaaccactggaggattctaacaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aactaaggagtttggatgtcattatataaaccggggaaccactggaggattctaacaaga 379
Query: 181 ggactga 187
|||||||
Sbjct: 380 ggactga 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 588
Length adjustment: 8
Effective length of query: 181
Effective length of database: 580
Effective search space: 104980
Effective search space used: 104980
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no170_i11.g1 MSMg01no170_i11.g1 CHROMAT_FILE:
MSMg01no170_i11.g1 PHD_FILE: MSMg01no170_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:30 2005
(288 letters)
>mm_chr5_92739521_92740208
Length = 688
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 caggaccgccaaggctacacagagaaacctgtctcaaaaaacaaaaccaaacaaacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caggaccgccaaggctacacagagaaacctgtctcaaaaaacaaaaccaaacaaacaaac 474
Query: 61 caacaccaacaaaaaaacaatctaacctccacccctgctctttgccattctctaaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caacaccaacaaaaaaacaatctaacctccacccctgctctttgccattctctaaaacat 414
Query: 121 attctctaagcatactcctcatggatttttttcttctacctttagtacagcctaaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 attctctaagcatactcctcatggatttttttcttctacctttagtacagcctaaaagaa 354
Query: 181 aatgattctcatttctgacaaggtttttgttttagtgatgtgtgtgcaactctgtgtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aatgattctcatttctgacaaggtttttgttttagtgatgtgtgtgcaactctgtgtggg 294
Query: 241 tatgtgtgctgtgagcacaggcacctgctgagggcacacatttctca 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tatgtgtgctgtgagcacaggcacctgctgagggcacacatttctca 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
