CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGATCTTTCCAAGACTTTTATCATGAATGGGTATTGGAATTTGT
CAAATGCTTTCTCTGCATCTAAGGAGATGATCATGTGGTTTTTGTCTTTG
AGTTTGTTTATATAATGGATTACGTTGATGGATTTCCATATATCAAACCA
TCCCTGCATCCCTGGAATTAAACCTACTTGGTCAGGATGGATGATTGTTT
TGATGCCATCTCGTAGACGGTTAGCGCTACTCTCATTTGAATATTTTTCA
ATGTCCCTGGTTAAATGAATATTTTCTTAATCCACTTATATTTGACCAAA
GTACTTGGACATAAAATAGGACCAATTCCCAGTCTTCTACGTGATTAACG
TCACTTGTGACCCCCCCCCTCGAAGGCAAATTGACCTGCTTTCAAAAGGG
GGGGGGGACCACCACATGTAATTGATAAAACGCCCAAATATGTTGCTCCA
CTTACTCCGTATCCGGCAATTACGAATCAATAAAAACATGGTGGACAGGG
AGTGGGGCAACGGCCGTGCAAGAAAAAATAGGGGCTTCGTCCCCACTTAT
AAACTCCATATTAAGGCACTAAAAAGGTTTAACCAGTAGAATTACTTAAA
ATTTTTGCGCTACAAAATTGTCGATAAAAACGGTGGTAAAGCTGAAAATC
TGGAAAAATAAAATAGGGGGAAAAATGGTCCACGTAACAATAATGTCGAA
AAATGGCGAAAATATA

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTCATTTCTTAAACAAAAGTTGT
ATCTATAAATAAAATTCACAGATGCACAAGGCTCTCAAAGAGACATGAAT
GTTGCAAAGGACTGTGTAACTTTATGGTCAATTATGCTCCTCACAGCAAT
CTCTGTAAGTGGAACTTAATTCGTCTTTATGATTTGTTTTAAACTGAGAG
CTGGCCAACCTGTATCACAATTGAACTCATCAACTACATGGTCTTATATG
CAAGTTCACATAAAGATATCAAAAAGATCAAATATCAACAGTCTTAATGG
AAAAAGACTTATTGGGATGCATTTCTGTATATCTTCAATTATATATACAT
ATATAATGGTTTGTATGTTAAATTTATATTTCATGCTGATTTTTCACTTT
ACAAACTTGAAAACAAGAGAAATATTTAGCTACTTAGTCAATGCCTCTTC
AAAAGTGCAAGATATTCATAAGAGGTACAAAGTCACTCTTCCTGAAGTAA
AACTCAGGGATAAAAATATTATGAAAAATATCTTATAAATATAAAGAAGT
GGTCTGCAAAACTCAAACTACGGAAATTATGGAATGAATGTTGCATAATT
TTCAGTAAAAAGTAATTTGATAAGGAGTAAATAGTTCTTTTTATACACGT
TTACTAGTTTTAGGATTATTTAGGCAATTATN

Query= MSMg01no177_b23.g1 MSMg01no177_b23.g1 CHROMAT_FILE:
MSMg01no177_b23.g1 PHD_FILE: MSMg01no177_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:37 2005
         (656 letters)



>mm_chr5_62573552_62574607
          Length = 1056

 Score = 1141 bits (590), Expect = 0.0
 Identities = 636/656 (96%), Gaps = 10/656 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcatttcttaaacaaaagttgtatctataaataaaattcacagatgcacaaggctctc 60
           ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 201 tttcatttcttaaacaaaagttgtatctacaaataaaattcacagatgtacaaggctctc 260

                                                                       
Query: 61  aaagagaca-tgaatgttgcaaaggactgtgtaactttatggtcaattatgctcctcaca 119
            |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaga-actgaatgttgcaaaggactgtgtaactttatggtcaattatgctcctcaca 319

                                                                       
Query: 120 gcaatctctgtaagtggaacttaattcgtctttatgatttgttttaaactgagagctggc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcaatctctgtaagtggaacttaattcgtctttatgatttgttttaaactgagagctggc 379

                                                                       
Query: 180 caacctgtatcacaattgaactcatcaactacatggtcttatatgcaagttcacataaag 239
           ||||||||||||||||||||||        ||||||||||||||||||||||||||||||
Sbjct: 380 caacctgtatcacaattgaact--------acatggtcttatatgcaagttcacataaag 431

                                                                       
Query: 240 atatcaaaaagatcaaatatcaacagtcttaatggaaaaagacttattgggatgcatttc 299
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atatcaaaaagatcaaatatcgacagtcttaatggaaaaagacttattgggatgcatttc 491

                                                                       
Query: 300 tgtatatcttcaattatatatacatatataatggtttgtatgttaaatttatatttcatg 359
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 492 tgtatatcttcaattatatatacatatataatagtttgtatgttaaatttatatttcatg 551

                                                                       
Query: 360 ctgatttttcactttacaaacttgaaaacaagagaaatatttagctacttagtcaatgcc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctgatttttcactttacaaacttgaaaacaagagaaatatttagctacttagtcaatgcc 611

                                                                       
Query: 420 tcttcaaaagtgcaagatattcataagaggtacaaagtcactcttcctgaagtaaaactc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcttcaaaagtgcaagatattcataagaggtacaaagtcactcttcctgaagtaaaactc 671

                                                                       
Query: 480 agggataaaaatattatgaaaaatatcttataaatataaagaagtggtctgcaaaactca 539
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 672 agggataaaaatattatgaaaaatatcttataaatatatagaagtggtctgcaaaactca 731

                                                                       
Query: 540 aactacggaaattatggaatgaatgttgcataattttcagtaaaaagtaatttgataagg 599
           ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 732 aactacggaaattttggaatgaatgttgcataattttcagtaaaaaataatttgttaagg 791

                                                                   
Query: 600 agtaaatagttctttttatacacgtttactagttttaggattatttaggcaattat 655
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 792 agtaaatagttcttttcatacacgtttactagttttaggattatttaggcaattat 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)