Query= MSMg01no181_o22.b1 MSMg01no181_o22.b1 CHROMAT_FILE:
MSMg01no181_o22.b1 PHD_FILE: MSMg01no181_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:32 2005
(687 letters)
>mm_chr5_3624306_3625392
Length = 1087
Score = 1288 bits (666), Expect = 0.0
Identities = 681/686 (99%)
Strand = Plus / Minus
Query: 2 ggaattctatgccaatttctcctcccaacagtataaatctatggttctgtgctagactca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 ggaattctatgccaatttctcctcccaacagtataaatctatggttctgtgctagactca 828
Query: 62 acacatcgcaggccctgacaacaagagttgccatccatcacaagcaacccaaagtccttc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 acacatcgcaggccctgacaacaagagttgccatccatcacaagcaacccaaagtccttc 768
Query: 122 accattcctttactttgcatgactcctggatctcacacaactgctcttatttctcagtct 181
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 atcattcctttactttgcatgactcctggatctcacacaactgctcttatttctcagtct 708
Query: 182 tcctgattcaacacactctgccctagactctacctgcagcctttatctttccctcgatct 241
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 707 tcctgattcaacacactctgccctagactctacctgcagcctctatctttccctcgatct 648
Query: 242 agttcatgctacctgtcaactctgcctttttaggactagttcccagagtccaaaagtctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 agttcatgctacctgtcaactctgcctttttaggactagttcccagagtccaaaagtctg 588
Query: 302 catagtccactgtcctgtgaaccctgggggctctctgtcttacactgttcctatctgctt 361
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 587 catagtccactgtcctgtgaacccagggggctctctgtcttacactgttcctatctgctt 528
Query: 362 ctgttgaaatttcagcaaatctgagcaacttaagcaaaagaaagaaattcatgccaaaat 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 527 ctgttgaaatttcagcaaatctgagcaacttaagcaaaagaaagatattcatgccaaaat 468
Query: 422 ggcaacattcatgccaacatttacaggccgagaaaatatcaaaattctgttttgtttggt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggcaacattcatgccaacatttacaggccgagaaaatatcaaaattctgttttgtttggt 408
Query: 482 aatttgatagatacttgtcaatcaaatggaaattggatgagctaacaaataaagccctag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aatttgatagatacttgtcaatcaaatggaaattggatgagctaacaaataaagccctag 348
Query: 542 ccaatggctgaggatttcttctggccattagtgctccgttcatgtgtgtcatgtgtttta 601
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 347 ccaatggctgaggatttcttctggccattagtgctctgttcatgtgtgtcatgtgtttta 288
Query: 602 tcttaccttggctggtaactggatagtatccatgaggatctgccgaacttcatgtaatcc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcttaccttggctggtaactggatagtatccatgaggatctgccgaacttcatgtaatcc 228
Query: 662 accaatcttgtcccagcccaggtctc 687
||||||||||||||||||||||||||
Sbjct: 227 accaatcttgtcccagcccaggtctc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_o22.g1 MSMg01no181_o22.g1 CHROMAT_FILE:
MSMg01no181_o22.g1 PHD_FILE: MSMg01no181_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:32 2005
(291 letters)
>mm_chr5_3481815_3482505
Length = 691
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Plus
Query: 1 acatacatgacatatacatgcatgacacatatacatgcatgcaagaaaatcaccatacaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 acatacatgacatatacatgcatgacacatatacatgcatgcaagtaaatcaccatacaa 260
Query: 61 ataaaatgcataaaaatctttaaaaactggacaccctttcctttctgttcctcgtgccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaatgcataaaaatctttaaaaactggacaccctttcctttctgttcctcgtgccta 320
Query: 121 ccagccttctgcagtggtaccaaataactgaccccttcaggagaaatatgctgctgtctg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagccttctgcagtggtaccaaatgactgaccccttcaggagaaatatgctgctgtctg 380
Query: 181 cctcttgttgcacaatcccgactgcatccgtcttactgagcttgtctctgccatgctctt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcttgctgcacaatcccgactgcatccgtcttactgagcttgtctctgccatgctctt 440
Query: 241 cctgagcacataggatgtccaccatggctgcagcaaggaaatgggtgggtg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgagcacataggatgtccaccatggctgcagcaaggaaatgggtgggtg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
