Query= MSMg01no182_k21.b1 MSMg01no182_k21.b1 CHROMAT_FILE:
MSMg01no182_k21.b1 PHD_FILE: MSMg01no182_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:29 2005
(614 letters)
>mm_chr5_59373338_59374351
Length = 1014
Score = 1104 bits (571), Expect = 0.0
Identities = 600/615 (97%), Gaps = 10/615 (1%)
Strand = Plus / Minus
Query: 5 ggaattcattgtctagtaccaatcattgtaatgtcatatgcatttatgatcctatttaga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 ggaattcattgtctagcaccaatcattgtaatgtcatatgcatttatgatcctatttaga 755
Query: 65 taaataaaataatgccccatttgttagttgttttattgtactctataaaataaacattta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 taaataaaataatgccccatttgttagttgttttattgtactctataaaataaacattta 695
Query: 125 ggatttatgtctcgaataaatattcaacgcatgtttatttattatcattgtcatgcattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ggatttatgtctcgaataaatattcaacgcatgtttatttattatcattgtcatgcattt 635
Query: 185 ataattcaataatatattttattccacattttatgacatttacttttataatttgaaaaa 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 634 ataattcaataatatattttattccacattttatgacattcacttttataatttgaaaaa 575
Query: 245 gcacttcaattaactatgaaatatttatagctcctatatagctgagagaaaactgagaac 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 acacttcaattaactatgaaatatttatagctcctatatagctgagagaaaactgagaac 515
Query: 305 tatttcttattcttataactttcctattttaaaattgattgtattaattttagacatttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tatttcttattcttataactttcctattttaaaattgattgtattaattttagacatttc 455
Query: 365 tgttccata-----ccccctaaacacctcgtatgtttttctctggctgttttcctgaagg 419
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgttccataaaaat-----taaacacctcgtatgtttttctctggctgttttcctgaagg 400
Query: 420 ttgcctaatcgagaagattacttcagtgagagatgacttctacagtgttatagcaaatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttgcctaatcgagaagattacttcagtgagagatgacttctacagtgttatagcaaatta 340
Query: 480 actagaagctaagactaataatctacagtgaatcacaaaaatatctacaattgccttctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 actagaagctaagactaataatctacagtgaatcacaaaaatatctacaattgccttctc 280
Query: 540 cacccatctatgcttcctgacagcattttgtcttaaacagtaaagattattttccattga 599
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 279 cacccatctatgcttcctgacagcattttgtcttaaacagtaaagtttattttccattga 220
Query: 600 cttacatcataaaag 614
|||| ||||||||||
Sbjct: 219 cttaaatcataaaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_k21.g1 MSMg01no182_k21.g1 CHROMAT_FILE:
MSMg01no182_k21.g1 PHD_FILE: MSMg01no182_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:29 2005
(338 letters)
>mm_chr5_59207081_59207818
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 328/334 (98%)
Strand = Plus / Plus
Query: 5 attcactttgtagaccaggctggcctcgaactcagaattccgcctgcctctgcctcctga 64
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||
Sbjct: 205 attcactttgtagaccaggctggccttgaactcagaaatccgcctgcctctgcctcccga 264
Query: 65 gtgctgggattaaagttgtgtgccactacgcccggctcaaaatatatgttcttgacaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 gtgctgggattaaagttgtgtgccactacgcccggctcaaaatatatgttcttcacaaaa 324
Query: 125 taaaaggacaatatctttagagttttctaaatgaaccagtgattgcatagaaaaggttgt 184
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaaaggacaatatatttagagttttctaaatgaaccagtgattgcatagaaaaggttgt 384
Query: 185 tttgtccatgcattattaaattttctgaaccttgaactaaagcagtctccaagatcagag 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgttcatgcattattaaattttctgaaccttgaactaaagcagtctccaagatcagag 444
Query: 245 aaaggcacatgtgatgtaaggttctctctagattttgaagtatatattcctagatgagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaggcacatgtgatgtaaggttctctctagattttgaagtatatattcctagatgagaa 504
Query: 305 aaacataacatatgtgctttgcaaattaatctgt 338
||||||||||||||||||||||||||||||||||
Sbjct: 505 aaacataacatatgtgctttgcaaattaatctgt 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
