Query= MSMg01no182_o10.b1 MSMg01no182_o10.b1 CHROMAT_FILE:
MSMg01no182_o10.b1 PHD_FILE: MSMg01no182_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:46 2005
(339 letters)
>mm_chr5_21599190_21599928
Length = 739
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Minus
Query: 1 tgaagtctgaatctttaaaaaaacactgaacccaaaggaagaaaatatgtgataaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgaagtctgaatctttaaaaaaacactgaacccaaaggaagaaaatatgtgataaagtta 480
Query: 61 taacatctatgtaacaaaaggctttggaaacacaatgtgcaggccagcccgtcagctccc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tagcatctatgtaacaaaaggctttggaaacacaatgtgcaggccagcccgtcagctccc 420
Query: 121 accacacagcacctcttactttcatacgcaagttcatatgccagtatattttattcccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 accacacagcacctcttactttcatacgcaagttcatatgccagtatattttattcccag 360
Query: 181 ccagacagtggctaatttacggctctgccaacaatgccattttaattaattttattcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ccagacagtggctaatttacggctctgccaacaatgccattttaattaattttattcatc 300
Query: 241 ttatttctctttcctctgttcctcatatctcatctgtttgcattgcctagattttaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttatttctctttcctctgttcctcatatctcatctgtttgcattgcctagattttaatta 240
Query: 301 aaaatcttctcctctctaaggagcaatctgaagtggcaa 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaaatcttctcctctctaaggagcaatctgaagtggcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_o10.g1 MSMg01no182_o10.g1 CHROMAT_FILE:
MSMg01no182_o10.g1 PHD_FILE: MSMg01no182_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:47 2005
(327 letters)
>mm_chr5_21427442_21428171
Length = 730
Score = 582 bits (301), Expect = e-171
Identities = 322/331 (97%), Gaps = 5/331 (1%)
Strand = Plus / Plus
Query: 1 acaatacaaaacatcagcaaaaaagaaactgattatctgtaaaatgctaagtttatctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaatacaaaacatcagcaaaaaagaaactgattatctgtaaaatgctaagtttatctca 260
Query: 61 ttagtgttctttatacttaaatatttaggtatgtatagttaaatattcaagaaaagta-- 118
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagtgttctttatacttgaatatttaggtatgtatagttaaatattcaagaaaagtatt 320
Query: 119 --tttttttggttatatcagcagcactgaggctgttttcttccttttctaaaatttaatt 176
||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 321 tttttttttggttatatcagcagcactgaggctgttttctt-ctttttttaaatttaatt 379
Query: 177 ttatttgtaattcattttttacaccccatattccattccctgcccctcccctcccaccct 236
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 ttatttgtaattcattttttacaccccatattccattccccgcccctcccctcccaccct 439
Query: 237 ccaactgccccacatcccacacctcctccccaccacaccctgtatccacatggatgctcc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccaactgccccacatcccacacctcctccccaccacaccctgtatccacatggatgctcc 499
Query: 297 catccccaaccccacctgacctctaaactcc 327
|||||||||||||||||||||||||||||||
Sbjct: 500 catccccaaccccacctgacctctaaactcc 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 730
Length adjustment: 9
Effective length of query: 318
Effective length of database: 721
Effective search space: 229278
Effective search space used: 229278
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
