Query= MSMg01no184_p10.b1 MSMg01no184_p10.b1 CHROMAT_FILE:
MSMg01no184_p10.b1 PHD_FILE: MSMg01no184_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:33 2005
(160 letters)
>mm_chr5_127641425_127641989
Length = 565
Score = 236 bits (122), Expect = 5e-67
Identities = 150/163 (92%), Gaps = 7/163 (4%)
Strand = Plus / Plus
Query: 4 ggaattcaaggttgctctgactacatggcaagagccatgctagcttaggctaaaaaagag 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 204 ggaattcaaggttgctctgactacatggcaagagccatgctagcttaggctaaaaa-gag 262
Query: 64 agaccctgcctccaagatggaagg------ggaagaaggagaagataggaaagggggtgg 117
|||||||||||||||||||||||| ||||||||| |||| |||||||| || |||
Sbjct: 263 agaccctgcctccaagatggaaggtgaaagggaagaaggggaaggtaggaaagaggatgg 322
Query: 118 gaagaaaaggaaaaaggtccctgcttanaatgtttgtagagat 160
||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 323 gaagaaaaggaaaaagggccctgcttagaatgtttgtagagat 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 565
Length adjustment: 8
Effective length of query: 152
Effective length of database: 557
Effective search space: 84664
Effective search space used: 84664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no184_p10.g1 MSMg01no184_p10.g1 CHROMAT_FILE:
MSMg01no184_p10.g1 PHD_FILE: MSMg01no184_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:33 2005
(282 letters)
>mm_chr5_127793689_127794370
Length = 682
Score = 545 bits (282), Expect = e-160
Identities = 282/282 (100%)
Strand = Plus / Minus
Query: 1 catagccatccacagaagaccagaagggctgtagaaaccagacctggctggtctgcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 catagccatccacagaagaccagaagggctgtagaaaccagacctggctggtctgcagag 423
Query: 61 agcctggctttgtcagtgaaaggagccacaaaggatccttcttgctatacaaaacaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agcctggctttgtcagtgaaaggagccacaaaggatccttcttgctatacaaaacaggaa 363
Query: 121 gatcagaagaaatggtgctgaccgaactcttatagaaggggtactgtcaccatagctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gatcagaagaaatggtgctgaccgaactcttatagaaggggtactgtcaccatagctggg 303
Query: 181 gcatctgctgggagcagagtcttagctgctcctgaaatgatttctcaggcagaacacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcatctgctgggagcagagtcttagctgctcctgaaatgatttctcaggcagaacacaga 243
Query: 241 ccatgaacatgacttcttggtggtgttttcatatgatggtgg 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccatgaacatgacttcttggtggtgttttcatatgatggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
