Query= MSMg01no189_m12.b1 MSMg01no189_m12.b1 CHROMAT_FILE:
MSMg01no189_m12.b1 PHD_FILE: MSMg01no189_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:50 2005
(145 letters)
>mm_chr5_76816398_76816940
Length = 543
Score = 240 bits (124), Expect = 3e-68
Identities = 133/136 (97%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 6 aattctagataattcttattaatccattcagcaagggaagagaatgatttttaactctca 65
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 206 aattctagataattcttattaatccattgagcaagggaagagaatgatttttaactctca 265
Query: 66 atactcagagcaaggcctgaagtaagaattcaatagatccactgtagaaaggatgggaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atactcagagcaaggcctgaagtaagaattcaatagatccactgtagaaaggatgggaag 325
Query: 126 gaaggggggaggggga 141
|||||||| ||||||
Sbjct: 326 -aagggggg-ggggga 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 543
Length adjustment: 8
Effective length of query: 137
Effective length of database: 535
Effective search space: 73295
Effective search space used: 73295
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no189_m12.g1 MSMg01no189_m12.g1 CHROMAT_FILE:
MSMg01no189_m12.g1 PHD_FILE: MSMg01no189_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:51 2005
(282 letters)
>mm_chr5_76878718_76879399
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 tgtcctgtacaagcaggaattgtctcagattccttttgtgtgagcttcattcttagaaaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 482 tgtcctgtacaagcaggaattgtctcagattccttttgtgtgtgcttcattcttagaaaa 423
Query: 61 ggtttaataatattgcctcactttaaaaaatgatggatatttataaatttcagtggggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggtttaataatattgcctcactttaaaaaatgatggatatttataaatttcagtggggaa 363
Query: 121 ttgttttccttaagcaacatttcattcaatgaagactgacatcagtgttcactcaaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgttttccttaagcaacatttcattcaatgaagactgacatcagtgttcactcaaattt 303
Query: 181 accctcttaagttgagatgaaaagctgaaaataaatcaatatgctcataaatatttaatg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acccttttaagttgagatgaaaagctgaaaataaatcaatatgctcataaatatttaatg 243
Query: 241 gtgttcataggctcttagagtacattataaccttatctatat 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtgttcataggctcttagagtacattataaccttatctatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
