CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTCTTCATGTCCTAACTATAACAGAATACTTAAATGCTAGCATCC
TCTGTGTTCTGAGATGGCCACTGCAGCAGAGGCTGATTGCCATCTTTGGG
CTTCTTTACCTAAAACGCATCTCCCAGACTTATACAGCCCTCCACCACAG
AAGCCAGCTTGTCACAATCCTACAAGTTAGCCACCTCTCAGATTTAAAAA
GATGGGGGAACTCTGGACTTTTCAATGATCAGCACTGTGGTAGGCATTTA
GATATTTACCTCTCACACACAAAAAAGTAATGTTCCCGAAGTGATTCTCA
TTTTATGTAGTTAATACATTTCTAATGTAGAGGTTAGGATATTTTCCTGG
GTGACTAAAGAACGCATTCTGTTAGAATGACTTCGCCAGTCACTTTGGTA
ACTAAAGTTTTCAATCTGACTCCATCAGCCATGGAGTCAGTAATATGGTG
GCACAGGTTCCAAGGCTCAGGTTCCTGTGAGACATTTAATCCACAAACTA
GTCCATAGACTTGCCCTAAATTCTGATTTACACAAACGCTAATATTTGAT
ACCTTTAAGTACCTCAAATAGTACCTTGTGCCTATCGTGCCCTCTGCTGT
CATGATAGGTAAGTCTTCACCAGGAGAGTGGACCTG

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTATCTCGTGCTCTCGACTGCAGTA
AACGCACTGGTCTAGTCTTTTCTCCCAATACTTAACGAAGATAATTCTCA
TGCTCCATTTATTTCCTGCCTTGTGTATTAACTGACCGAGATTTCGTTCC
CACTTTGTGAGCATGCTGGGCGTGAAATCTAAATCGTGAGACTTGAGTGC
TGGTCTCCTTTAGCTGGCGGATATCTTTGAAATTATGACATGCTGTATCA
AAAGCTGAGATGGAACGACCTTTCTTTGAACATTCTTAGAGATCCTGTAT
AGTCTAAGAGTCTTTTGATATACCCCCCCCACCATATAGATATCTATGAT
TATTTCCTGAATCATTGACTGAATGAAAAAATATTCTCTGCTTTGAACGA
CCTGAATCTGTTCAGCCTGTTACCATATGACTGCCTTTGTGTAATATCAC
TGTATGTATAGGTTTGATTTTAATATATACTATGATTGTGACCAGACTAT
CACGATTGATGTATTTGGAGAGATATCAAATGCAATACTTGATAAAAAGA
CTAGTCTTGTAGAGATATTCCATGTCATTTCAGAACCCTATATAGTAATG
GCGCCTCTTGAAAAAAAGGAGAACGCGGCAATTCCCTAATTATTTGCATA
TATTGTAATAAGAAAACCCCGCTATGTCTT

Query= MSMg01no197_k19.b1 MSMg01no197_k19.b1 CHROMAT_FILE:
MSMg01no197_k19.b1 PHD_FILE: MSMg01no197_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:39 2005
         (637 letters)



>mm_chr5_21382282_21383318
          Length = 1037

 Score = 1170 bits (605), Expect = 0.0
 Identities = 626/633 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcttcatgtcctaactataacagaatacttaaatgctagcatcctctgtgttc 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaattcctctccatgtcctaactataacagaatacttaaatgctagcatcctctgtgttc 778

                                                                       
Query: 65  tgagatggccactgcagcagaggctgattgccatctttgggcttctttacctaaaacgca 124
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tgagatgggtactgcagcagaggctgattgccatctttgggcttctttacctaaaacgca 718

                                                                       
Query: 125 tctcccagacttatacagccctccaccacagaagccagcttgtcacaatcctacaagtta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tctcccagacttatacagccctccaccacagaagccagcttgtcacaatcctacaagtta 658

                                                                       
Query: 185 gccacctctcagatttaaaaagatgggggaactctggacttttcaatgatcagcactgtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gccacctctcagatttaaaaagatgggggaactctggacttttcaatgatcagcactgtg 598

                                                                       
Query: 245 gtaggcatttagatatttacctctcacacacaaaaaagtaatgttcccgaagtgattctc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtaggcatttagatatttacctctcacacacaaaaaagtaatgttcccgaagtgattctc 538

                                                                       
Query: 305 attttatgtagttaatacatttctaatgtagaggttaggatattttcctgggtgactaaa 364
           |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 attttaggaagttaatacatttctaatgtagaggttaggatattttcctgggtgactaaa 478

                                                                       
Query: 365 gaacgcattctgttagaatgacttcgccagtcactttggtaactaaagttttcaatctga 424
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaatgtattctgttagaatgacttcgccagtcactttggtaactaaagttttcaatctga 418

                                                                       
Query: 425 ctccatcagccatggagtcagtaatatggtggcacaggttccaaggctcaggttcctgtg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctccatcagccatggagtcagtaatatggtggcacaggttccaaggctcaggttcctgtg 358

                                                                       
Query: 485 agacatttaatccacaaactagtccatagacttgccctaaattctgatttacacaaacgc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agacatttaatccacaaactagtccatagacttgccctaaattctgatttacacaaacgc 298

                                                                       
Query: 545 taatatttgatacctttaagtacctcaaatagtaccttgtgcctatcgtgccctctgctg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 taatatttgatacctttaagtacctcaaatagtaccttgtgcctatcgtgccctctgctg 238

                                            
Query: 605 tcatgataggtaagtcttcaccaggagagtgga 637
           |||||||||||||||||||||||||||||||||
Sbjct: 237 tcatgataggtaagtcttcaccaggagagtgga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)