CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGAAGTTTGAGACAGGGAGAACTCTGAGTTCAAGGTCATCTGAGA
TTAAAGGTGTAGTGTTATCCACCTTTAATCTTGGCTACACCTTCTTCTGC
TGGAGACTTACATAAGGACATTAAAAGAAGGAAGTCTTTCTCTCCTTTGC
CTTCTTGCCTTGTGGGACTGAGCAACTGCTAGATCCTTGGACTACAATTC
ATAGCTGCTACTGACCATTGTTGGGAGTTGGACGGCAGACTATAAGTCAT
CAATAAATTTCTTTACTAAATAGAGACTATCCATAAGTTCTGTAACTCTA
GAGATTTCTGACTACCACACACCCCATGGCTATAGATTCAATGTTCTTGA
ATTCAACCAAAAAGCGGATCTAAAACTATGGGAAAATTTTTTTTCTATAT
TAAAAATTCTCCAACTTTTTTATTAATTGAATATAACAACACAACAATTT
ATATCGCATTTACATTGCATTAGTTATCATCAGTGAGCGAAAAAGCATTT
TAAGAATGAAGAAAGATACATAGAATTTATAATAATAATAAGATATTATG
AGATTTCAGTTAAGGGAATTCAGCATCTGAGATTATGATATCTCTAGATA
ANAAATTTTGCAGACTATTTTAACATTCAGCATCATCTCCTGCCCACCAC
CCACCAGGGGTAGTGCACCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCGTAGATGCTTAGATGGAGAAAG
AAATCTATATCCTGTATCTGATCGTCAGCAGTTTTCATTGAACAGTCTAT
ATCTACATTTGTTTATATGAATGGCCAGCATATGAATTCCAGTTTTTTTC
TGTTCAGCATAAATCATGTAAAGAGAAAGCAATATATTACATTCATCTTT
TAAAATTATTTTGATCAAATTATGTGTCTTTTAGTAAGTATTTTTTGAGA
TATTTCTTAGTCATTTTTATTTCTTCTTTTGTTTGCTACATTCAGGTCTA
TAGTCAAACTTTAATTTGGTAATTTCGAAGCATAATTAAAAATTAATTTT
TGTTTCATTTTCTCTGCTCGCCTTAAGGGTAGCTAGAAACAAACTAGGGG
TGAACTTCAAGATGAGCTAGCTAAGCAGAGGAGAGAAGGAGGAGCTAGCT
GGACAGGGTCTTGAAGTTTGAGTTGAAGGAGCAGTTGACATCAACCAAAG
GGATGAAAGTTGACACTCATCTCTTTCTGTCCCCTAATGGTCTACAACCC
CTTTATCCCTAGTCATTTGTGTTTGATAAGCTTACAGTCACAGTCACAGG
GACTTTCAAGCTGACCATGGACCAGCTACTTTTTAATACTTGGAACTGCA
GCTTTTGAAGATATTT

Query= MSMg01no202_f20.g1 MSMg01no202_f20.g1 CHROMAT_FILE:
MSMg01no202_f20.g1 PHD_FILE: MSMg01no202_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:09 2005
         (614 letters)



>mm_chr5_80705025_80706037
          Length = 1013

 Score = 1172 bits (606), Expect = 0.0
 Identities = 612/614 (99%), Gaps = 1/614 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cgtagatgcttagatggagaaagaaatctatatcctgtatctgatcgtcagcagttttca 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 813 cgtagatgcttagatggagaaagaaatctatatcctgtatctgatagtcagcagttttca 754

                                                                       
Query: 61  ttgaacagtctatatctacatttgtttatatgaatggccagcatatgaattccagttttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 753 ttgaacagtctatatctacatttgtttatatgaatggccagcatatgaattccag-tttt 695

                                                                       
Query: 121 ttctgttcagcataaatcatgtaaagagaaagcaatatattacattcatcttttaaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ttctgttcagcataaatcatgtaaagagaaagcaatatattacattcatcttttaaaatt 635

                                                                       
Query: 181 attttgatcaaattatgtgtcttttagtaagtattttttgagatatttcttagtcatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 attttgatcaaattatgtgtcttttagtaagtattttttgagatatttcttagtcatttt 575

                                                                       
Query: 241 tatttcttcttttgtttgctacattcaggtctatagtcaaactttaatttggtaatttcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tatttcttcttttgtttgctacattcaggtctatagtcaaactttaatttggtaatttcg 515

                                                                       
Query: 301 aagcataattaaaaattaatttttgtttcattttctctgctcgccttaagggtagctaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aagcataattaaaaattaatttttgtttcattttctctgctcgccttaagggtagctaga 455

                                                                       
Query: 361 aacaaactaggggtgaacttcaagatgagctagctaagcagaggagagaaggaggagcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aacaaactaggggtgaacttcaagatgagctagctaagcagaggagagaaggaggagcta 395

                                                                       
Query: 421 gctggacagggtcttgaagtttgagttgaaggagcagttgacatcaaccaaagggatgaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gctggacagggtcttgaagtttgagttgaaggagcagttgacatcaaccaaagggatgaa 335

                                                                       
Query: 481 agttgacactcatctctttctgtcccctaatggtctacaacccctttatccctagtcatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agttgacactcatctctttctgtcccctaatggtctacaacccctttatccctagtcatt 275

                                                                       
Query: 541 tgtgtttgataagcttacagtcacagtcacagggactttcaagctgaccatggaccagct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgtgtttgataagcttacagtcacagtcacagggactttcaagctgaccatggaccagct 215

                         
Query: 601 actttttaatactt 614
           ||||||||||||||
Sbjct: 214 actttttaatactt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space:   605812
Effective search space used:   605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)