Query= MSMg01no202_p16.b1 MSMg01no202_p16.b1 CHROMAT_FILE:
MSMg01no202_p16.b1 PHD_FILE: MSMg01no202_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:59 2005
(618 letters)
>mm_chr5_62462771_62463788
Length = 1018
Score = 1178 bits (609), Expect = 0.0
Identities = 615/617 (99%)
Strand = Plus / Minus
Query: 1 cgtaccatccactttggggttaggatttcagcatatgaaatgttagggaggcacatattt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cgtaccatccactttgaggttaggatttcagcatatgaaatgttagggaggcacatattt 758
Query: 61 tttagaatatagcctcttgcatttgaatgagtatttatgcttctgctgtggggtgaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tttagaatatagcctcttgcatttgaatgagtatttatgcttctgctgtggggtgaatgt 698
Query: 121 acaagttaggatagaaaatgaaataaagtagcatctctcatatataatttcaccgataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 acaagttaggatagaaaatgaaataaagtagcatctctcatatataatttcaccgataat 638
Query: 181 tttagaaatgtaaggacaccactcaatattaatgcctgattcataggcaaagcttcttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tttagaaatgtaaggacaccactcaatattaatgcctgattcataggcaaagcttcttga 578
Query: 241 ataatgttttcgtttaaaaccatattttagtagaagcatatataaaattataaaatgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ataatgttttcgtttaaaaccatattttagtagaagcatatataaaattataaaatgtgt 518
Query: 301 caaataagaacttgaagaactcacagttctctaagtacttggtgtattagtctcagaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 caaataagaacttgaagaactcacagttctctaagtacttggtgtattagtctcagaagc 458
Query: 361 acaaatctatctagctttggagttctttcagctttaatatctgtgatgtactttagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 acaaatctatctagctttggagttctttcagctttaatatctgtgatgtactttagagaa 398
Query: 421 agagaatgaaagttgatgctgtaagatcaccaaatcctttaatatatccaaagctttacc 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 397 agagaatgaaagttgatgctgtaagatcaccaaatcctttaatatacccaaagctttacc 338
Query: 481 ctgatgatgaagggtaaatggtttcataatgtttctctaaaattggtttatgtatttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctgatgatgaagggtaaatggtttcataatgtttctctaaaattggtttatgtatttgaa 278
Query: 541 tctcatgtttaaatatgtttatccttgaaagtaagtaacgtatgttcagtacctgaatac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tctcatgtttaaatatgtttatccttgaaagtaagtaacgtatgttcagtacctgaatac 218
Query: 601 attttctctactatata 617
|||||||||||||||||
Sbjct: 217 attttctctactatata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_p16.g1 MSMg01no202_p16.g1 CHROMAT_FILE:
MSMg01no202_p16.g1 PHD_FILE: MSMg01no202_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:59 2005
(604 letters)
>mm_chr5_62396257_62397256
Length = 1000
Score = 1079 bits (558), Expect = 0.0
Identities = 590/606 (97%), Gaps = 12/606 (1%)
Strand = Plus / Plus
Query: 3 tgattctatggtaagttcaggaagaacccaagaaatgcaacagtaagagacatttctctt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgattctatggtaagttcaggaagaacccaagaaatgcaacagtaagagacatttctctt 262
Query: 63 tatatagaccccatattgaaatacatgctaattatttgattttgttgtatatatcttgag 122
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tatatagaccctatattgaaatacatgctaattatttgattttgttgtatatatcttgag 322
Query: 123 ctcacaaaccagttgatactgtttaatttctgtaataaaaaactcttattttaatgtttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctcacaaaccagttgatactgtttaatttctgtaataaaaaactcttattttaatgtttt 382
Query: 183 ataaaaatcaagctttaaaagtcagtgataaaaaaaaa---ggaaaggactagaaagcag 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 ataaaaatcaagctttaaaagtcagtgataaaaaaaaaaaaggaaaggactagaaagcag 442
Query: 240 gaaggatctcaggatgtatgtatccacagagcaatgtaactcctataggaagatcattta 299
|| ||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 443 ga----tctcaggatgtat----ccacagagcaatgtaactcctacaggaagatcattta 494
Query: 300 gggtcatacggtcaacattagttctcaaaatcttcttggatatgggtaaaatagaataaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gggtcatacggtcaacattagttctcaaaatcttcttggatatgggtaaaatagaataaa 554
Query: 360 cagtgctagtggcaatctgtgtccattgaaaacagaaagcacacaccaaagtgaagggga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cagtgctagtggcaatctgtgtccattgaaaacagaaagcacacaccaaagtgaagggga 614
Query: 420 aaggaaggg-agggttaaaatactgataacaaatctcagaatgggaacaaagtatggcgg 478
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaggaaggggagggttaaaatactgataacaaatctcagaatgggaacaaagtatggcgg 674
Query: 479 ttcaaatggcagtagcattgggttgtcatcaagttaatttacttaacaaatttcatattc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttcaaatggcagtagcattgggttgtcatcaagttaatttacttaacaaatttcatattc 734
Query: 539 ctgaatcttgaacaataattcaaaaaatagtactactgttaacaagacctcatgtttggt 598
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 735 ctgaatcttgaacaataattcaaaaaatagtattactgttaacaagacctcatgtgtggt 794
Query: 599 gacaaa 604
||||||
Sbjct: 795 gacaaa 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1000
Length adjustment: 10
Effective length of query: 594
Effective length of database: 990
Effective search space: 588060
Effective search space used: 588060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
