CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATATCTATCCCATGATGGAGTCTTTCAAAATTAAAACTACAACTA
GGTTTAATTTCGAAGGTTCCCTGTGGTTTAGTAGCTTTCATATTTAATTA
TCACTTCAGTAAAATTTCAGGAGGGAGTGGGGATAAACAAGAACGTTCTC
TCTGTTTAATAAAAGCTTCATTAATTTATGTCCTACATACTGTGCTCTTA
TGTTTGATGAGAGCTAATTAATTATCCTTATCTAAATATGTTTTATAACT
TTTCCAAGTCATAAATCAGAAACCTTGTTGATCAGTTTAATTTACATAAG
GTTATACCTGCATGGTAAGCTCTAGAAGGCCTCGTGAGGTAAGGCAATAA
AATATTGGCCAAACAAGGAGATTTAGGCCAGGCTGGGTTACATGAAACTC
TGTTTCAAAGGAGCAAAACATACAAGCAAAAATAAAAAATGAGGGAAAGT
TATAGAAATAAACAAGGAAGAAATAATAATTAGTAAGTTTACAAGCCAGA
AGGTCAAAGAAGTTTTCAGGAAGGACTCGACATGTGTAAATATGCATAAA
GAACATTCAAATCCTAATTTACTGTATTAACTGCAATTGTCCTGTTGTTT
TTTAAATGTTTTTTAAATGTATTAATAAATGGAATGTCATTCCATTTATT
CTCCCATAATTTCTATT

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGGTACCAGAG
AACTCCTAAAGCTTACAAACAACCCCAGCAAAGTAGATGGATATAAAATT
ATCTCAAACCAATCATTGTCCTTCCTCTACACAAAGATTAAACTGGCTGA
GAAAGAAAATGGGAAACAACACCCATCACAATAGTTAGAAAAATTATAAA
GTACCTTGGTGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGACAAGA
ATTTCAAGTCTCTGTAGAAAGAAATCAAAGAAGATCTCAGAGGGATGCTC
CAACATGTAACACATGCTCCACTATGTTCATGGCAGCCTTATTTATATTA
GCCAGGAGCTGGGAAAAAACAACAACAAGAACAACAAACAACAACAACAA
CAAAACAAAAACAAAAACAAATGTCCCTCAACAGAGGAATGGATATAGAA
AATGTGGTACATTTACACATTTGAGTACTATTAAATCAATGAATTTATGA
AATCTTAGGCTAATGGATGGAACTAGATAATATCATCTTGAATGAGGGTA
ACAAATCACAAAAGAGCAGACATGATATGCACTCACTGATAAGTGGATAT
CAGTCCAGAAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAA
CTCAAGAAGAAAGAGGACCN

Query= MSMg01no206_p09.b1 MSMg01no206_p09.b1 CHROMAT_FILE:
MSMg01no206_p09.b1 PHD_FILE: MSMg01no206_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:18 2005
         (673 letters)



>mm_chr5_84075365_84076438
          Length = 1074

 Score = 1259 bits (651), Expect = 0.0
 Identities = 666/671 (99%), Gaps = 1/671 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaatatctatcccatgatggagtctttcaaaattaaaactacaactaggtttaa 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatatctatgccatgatggagtctttcaaaattaaaactacaactaggtttaa 263

                                                                       
Query: 64  tttcgaaggttccctgtggtttagtagctttcatatttaattatcacttcagtaaaattt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcgaaggttccctgtggtttagtagctttcatatttaattatcacttcagtaaaattt 323

                                                                       
Query: 124 caggagggagtggggataaacaagaacgttctctctgtttaataaaagcttcattaattt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caggagggagtggggataaacaagaacgttctctctgtttaataaaagcttcattaattt 383

                                                                       
Query: 184 atgtcctacatactgtgctcttatgtttgatgagagctaattaattatccttatctaaat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgtcctacatactgtgctcttatgtttgatgagagctaattaattatccttatctaaat 443

                                                                       
Query: 244 atgttttataacttttccaagtcataaatcagaaaccttgttgatcagtttaatttacat 303
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 atgttttataacttttccaagtcatcaatcagaaaccttgttgatcagtttaatttacat 503

                                                                       
Query: 304 aaggttatacctgcatggtaagctctagaaggcctcgtgaggtaaggcaataaaatattg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggttatacctgcatggtaagctctagaaggcctcgtgaggtaaggcaataaaatattg 563

                                                                       
Query: 364 gccaaacaaggagatttaggccaggctgggttacatgaaactctgtttcaaaggagcaaa 423
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccaaataaggagatttaggccaggctgggttacatgaaactctgtttcaaaggagcaaa 623

                                                                       
Query: 424 acatacaagcaaaaataaaaaatgagggaaagttatagaaataaacaaggaagaaataat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acatacaagcaaaaataaaaaatgagggaaagttatagaaataaacaaggaagaaataat 683

                                                                       
Query: 484 aattagtaagtttacaagccagaaggtcaaagaagttttcaggaaggactcgacatgtgt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aattagtaagtttacaagccagaaggtcaaagaagttttcaggaaggactcgacatgtgt 743

                                                                       
Query: 544 aaatatgcataaagaacattcaaatcctaatttactgtattaactgcaattgtcctgttg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaatatgcataaagaacattcaaatcctaatttactgtattaactgcaattgtcctgttg 803

                                                                       
Query: 604 ttttttaaatgtttttt-aaatgtattaataaatggaatgtcattccatttattctccca 662
           ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 804 ttttttaaatgtttttttaaatgttttaataaatggaatgtcattccatttattctccca 863

                      
Query: 663 taatttctatt 673
           |||||||||||
Sbjct: 864 taatttctatt 874


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space:   705432
Effective search space used:   705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)