Query= MSMg01no233_i10.b1 MSMg01no233_i10.b1 CHROMAT_FILE:
MSMg01no233_i10.b1 PHD_FILE: MSMg01no233_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:15 2005
(630 letters)
>mm_chr5_134067012_134068042
Length = 1031
Score = 1127 bits (583), Expect = 0.0
Identities = 616/627 (98%), Gaps = 1/627 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggctcctccagcactatgtctgcctgcacactgccttgcttcccactatgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggctcctccagcactatgtctgcctgcacactgccttgcttcccactatgat 264
Query: 65 gataatgggctgaccctctgaaactgtaagccagccccaattgaatggtttcctttataa 124
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 gataatgggctgaacctctgaaactgtaaaccagccccaattgaatggtttcctttataa 324
Query: 125 gagttgccttggtcatgttgtcccttcacatcactaaaacccaaactaaaacacttctag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagttgccttggtcatgttgtcccttcacatcactaaaacccaaactaaaacacttctag 384
Query: 185 agtttaagtctgtgctccaaaatacacatcttcaaaacaacctttacctttacatattga 244
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 385 agtttaagtctgtgctccaaaatatacatgttcaaaacaacctttacctttacatattga 444
Query: 245 tggcaattggaaacgaggcatttagaaggtgattaggattagatgagcttattagatggt 304
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 tggcaattggaaacaaggcatttagaaggtgattaggcttagatgagcttattagatggt 504
Query: 305 ctcatgatatagttgatgattgccatagtcatttttctaagaagaacagaacactgagca 364
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 505 ctcatgatatagttgatgattgccatagtcatttttctaagaagaacagaatactgagca 564
Query: 365 agcaacacacttcctgtcttgccatatcgtgccacaggacgacacaccctagacgccaat 424
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agcagcacacttcctgtcttgccatatcgtgccacaggacgacacaccctagacgccaat 624
Query: 425 cccacacatattttttt-aattaccccttctgtagttgtcaatgaaagcataagaaaatc 483
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 cccacacatattttttttaattaccccatctgtagttgtcaatgaaagcataagaaaatc 684
Query: 484 agccaagatattgctttacagttcaattgtaaatgtgaagatagttgttgcctataccat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agccaagatattgctttacagttcaattgtaaatgtgaagatagttgttgcctataccat 744
Query: 544 tagtgagagtcttttggttgggtctgtagttcaggggtgaaggcttgatatatatgacat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 745 tagtgagagtcttttggttgggtctgtagttcaggggtgaaggcttgatatatatgaaat 804
Query: 604 tagcttataggagacagacaggaacaa 630
|||||||||||||||||||||||||||
Sbjct: 805 tagcttataggagacagacaggaacaa 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space: 633020
Effective search space used: 633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_i10.g1 MSMg01no233_i10.g1 CHROMAT_FILE:
MSMg01no233_i10.g1 PHD_FILE: MSMg01no233_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:15 2005
(281 letters)
>mm_chr5_134183486_134184166
Length = 681
Score = 532 bits (275), Expect = e-155
Identities = 278/279 (99%)
Strand = Plus / Minus
Query: 1 ggtcctgatgatcacagagcaagtatccttaccccatttaactctttccccagcccagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggtcctgatgatcacagagcaagtatccttaccccatttaactctttccccagcccagct 420
Query: 61 agtgaccacatctctccttgagattatctggcacagtggcagagcgtcttcccagttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agtgaccacatctctccttgagattatctggcacagtggcagagcgtcttcccagttcct 360
Query: 121 gtgtaggaaagcccagacgtaaggaaaaatagatttaatatcctaactactcccacgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtgtaggaaagcccagacgtaaggaaaaatagatttaatatcctaactactcccacgtga 300
Query: 181 ccacttccaccaatcctgccttttcagagtggtccagtgtccaacttcccataggatctc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 299 ccacttccaccaatcctgccttttcagagtggttcagtgtccaacttcccataggatctc 240
Query: 241 atttcctgtgtttctgcccatgggtcctttctttacctc 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atttcctgtgtttctgcccatgggtcctttctttacctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
