Query= MSMg01no234_b02.b1 MSMg01no234_b02.b1 CHROMAT_FILE:
MSMg01no234_b02.b1 PHD_FILE: MSMg01no234_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:55 2005
(617 letters)
>mm_chr5_49415797_49416813
Length = 1017
Score = 1154 bits (597), Expect = 0.0
Identities = 612/617 (99%)
Strand = Plus / Minus
Query: 1 tcttgattctagaaaaattgctcagttcaaacattaattgagtttttgaatgtagaccca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 740 tcttgattctagaaaaattgctcagttcaaacattaattgagtttttgaatggagattca 681
Query: 61 aaatgcatatcatgctttgccattaaacagcattggttctttttttctttctgttttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaatgcatatcatgctttgccattaaacagcattggttctttttttctttctgttttacc 621
Query: 121 ttctgttcaaattttctctttgattcatctacaccagtgggtcatgctaatgagcccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttctgttcaaattttctctttgattcatctacaccagtgggtcatgctaatgagcccatt 561
Query: 181 tctggaaagaagaaatgatcccagaaatacatgattaatatctttggcttcaaccctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctggaaagaagaaatgatcccagaaatacatgattaatatctttggcttcaaccctcat 501
Query: 241 taatgtgacaggttttatgtcaatgtagaatttagtaaacatatggccattgtatttggt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaagtgacaggttttatgtcaatgtagaatttagtaaacatatggccattgtatttggt 441
Query: 301 atctatgagaaaaggtaatgagatccccattttctttccatactggcatgttaagagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atctatgagaaaaggtaatgagatccccattttctttccatactggcatgttaagagaca 381
Query: 361 tcttcatgatacgtcctattagggatagacaccgctgtggaccattcttttcccctggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcttcatgatacgtcctattagggatagacaccgctgtggaccattcttttcccctggaa 321
Query: 421 tgaaacttctcttggtcagtacaacaatccagacaaagaggattgaattcctgcagatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgaaacttctcttggtcagtacaacaatccagacaaagaggattgaattcctgcagatga 261
Query: 481 tcttcccttccccttttctcttctctaagctatgacacaggagaaaagtggacttgtgcc 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 260 tcttcccttccccttttctcttctctaaggtatgacacaggagaaaagtggacttgtgcc 201
Query: 541 atttaaataaaataaaaataacttttatacttctacttttatctccaacatgtatcttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atttaaataaaataaaaataacttttatacttctacttttatctccaacatgtatcttat 141
Query: 601 aaattgatgatcaccag 617
|||||||||||||||||
Sbjct: 140 aaattgatgatcaccag 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no234_b02.g1 MSMg01no234_b02.g1 CHROMAT_FILE:
MSMg01no234_b02.g1 PHD_FILE: MSMg01no234_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:55 2005
(680 letters)
>mm_chr5_49405485_49406564
Length = 1080
Score = 1230 bits (636), Expect = 0.0
Identities = 668/680 (98%), Gaps = 3/680 (0%)
Strand = Plus / Plus
Query: 1 tttgacagccctccctttcaaaggtgatgctgagttctcttcttctgtaatacaggttga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 204 tttgacagccctccctttcaaaggtgatgctgagttctcttcttctgtaatataggttga 263
Query: 61 acttaacaatcttaatgacggctttctaaccacagagttagaacaagctatgttgtatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acttaacaatcttaatgacggctttctaaccacagagttagaacaagctatgttgtatga 323
Query: 121 cttgcaaggtcatcaaaaggataaagcttctggatggctaacttccctgtaaacctgttt 180
|||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 cttgcaaggttatcaaaagaataaggcttctggatggctaacttccctgtaaacctgttt 383
Query: 181 gttttttgttttgtattgtttttgttgttgttgttgttgttaaatccagctttaatttgt 240
| |||||||||||| |||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 384 gatttttgttttgtgttgttt---ttgttgttgttgttattaaatccagctttaatttgt 440
Query: 241 gacaatgttcaggcagaactctgaaggatttcacatgaagaggaaggaaaaagccagccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacaatgttcaggcagaactctgaaggatttcacatgaagaggaaggaaaaagccagccc 500
Query: 301 cacctgcttcctgttaggggagtgaattttgaatctggttcaataaaggtaagttaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacctgcttcctgttaggggagtgaattttgaatctggttcaataaaggtaagttaaaga 560
Query: 361 ctttaggtaacaggaatccggactggcatcttatgcccagccccacagatgacactgagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttaggtaacaggaatccggactggcatcttatgcccagccccacagatgacactgagc 620
Query: 421 cataagcaccacactgtcatggattacttctgaattctttacctacagtagattgtgagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cataagcaccacactgtcatggattacttctgaattctttacctacagtagattgtgagt 680
Query: 481 tataattcatattaattatgtaaacaaatacatgcagcagaaaatgacaaatgcttttat 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 tataattcatattaattatgtaaacgaatacatgcagcagaaaatgacaaatgcttttat 740
Query: 541 ttccttgtttatccacataccgcatgttaactgagtgggaatgtcaccctgagtttgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttccttgtttatccacataccgcatgttaactgagtgggaatgtcaccctgagtttgcca 800
Query: 601 tcttagcaataacagtctggcaccatggacaaagttatcagatgcccaagggacacagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcttagcaataacagtctggcaccatggacaaagttatcagatgcccaagggacacagga 860
Query: 661 cactggaaggtggctgggtc 680
||||| ||||||||||||||
Sbjct: 861 cactgaaaggtggctgggtc 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
