TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGAATGTTATATCCTACTATGAAAGCCTATACATTTGAATTATTC
TACTCAGTCCTTGAAAGAAAGATGGTTCAACTTTAAGGATGTATTAAACA
ACCACATGATATATCAATTTATGTGAATAGACATTAAAATTCTTCACCAA
GCTGTAGTTTTTTTCTCGCCTATCATTTTTCTCTGAGAGGGATTGTGAAA
GAGTACCAACTGTATACAATATTTACACTTTAAGAAAAGAATGCTTTCCA
TACCAACGTATCTAACAGCCATCAATGACATCATGCAAAGATACATTCCT
TTTAAAAAGGGACTATGTACATTTTGAAGACTACTTCATTTCTTTGTATG
CTATTTGGAAATTTGCTCCCAAAGTTCGTTTCTTGATGCTTTATCATATA
TAAATATAGCACCACCCAGCTTATCATGTCACATGCACCAATTTTGGATG
AATGCTTCTTCATGTGATACTATTGCAGAGTCAATTAAAGCTGACTATTT
GCTTCCTCTGGCTAATCACTATGGGTAGGCACTGGCAGTAGATCAAAAAC
CACATGTGGGCCCTGACTTTCTAAGGTTGAGAGTTCATAAATTAGAAATG
GGAACAAAAAAGGGAAATGAAAAAGTAGCAGGGAAGTTATGAACTGGTAA
AAAGAAGAAAAAAAGGAGACAAATTTGGTGTATTAATTTGCA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATAACTCACTTAAAGAAATACAGGA
GAACACTGCTAAAGAGTTACTAGTCCCTAAAGAAAAACAGGAAAACACTG
CTAAAGAGTTACAAGTCCTTAAAGAAAAACAGGAAAACACAACCAAACAG
GTAGAAGTCCTTATAGAAAAACAGGAAAACACATCCAAACAGGTGATGGA
AATGAACAAAACCATACTAGACCTAAAAAGGGAAGTAGACACAATAAAGA
AAACCCAAAGTGAGGCGACGCTGGAGATAGAAACCCTAGGAAAGAAATCT
GGAACCATAGATGCCTTTTATCAGCACCCCACCCACAAGAGATGGAAGAG
AGAATCTCAGGTGCAGAAGACTCCATAGAGAACATCGGCACAACAATCAA
AGAAAATAGAAAATGCAATAAGATCCTAACTCAAAACATCCAGGAAATCC
AGGACACAATGAGAAGACCAAACCTACGGATAATAGGAGTGGATGAGAAT
GAAGATTTTCAACTCAAAGGACCAGCAAACATCTTCAACAAAATTATTGA
AGAAAACTTCCCAAATCTAAAGAAAGAGATGCCCATGAACATACAAGAAG
CCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACAC
ATAATAATCAGAACACCAAATGCACTAAATAAAGATAGAATACT

Query= MSMg01no234_b17.b1 MSMg01no234_b17.b1 CHROMAT_FILE:
MSMg01no234_b17.b1 PHD_FILE: MSMg01no234_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:59 2005
         (671 letters)



>mm_chr5_17512772_17513840
          Length = 1069

 Score = 1247 bits (645), Expect = 0.0
 Identities = 664/671 (98%), Gaps = 2/671 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctatgaaagcctatacatttgaattattctactcagtccttgaaagaaagatggttcaac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 869 ctatgaaagcctatacatttgaattattctactcagtccttgaaagaaagatggttaaac 810

                                                                       
Query: 61  tttaaggatgtattaaacaaccacatgatatatcaatttatgtgaatagacattaaaatt 120
           |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||
Sbjct: 809 tttaaggatgtattaaacaac--catgatatatcaattgatgtgaatagacattaaaatt 752

                                                                       
Query: 121 cttcaccaagctgtagtttttttctcgcctatcatttttctctgagagggattgtgaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cttcaccaagctgtagtttttttctcgcctatcatttttctctgagagggattgtgaaag 692

                                                                       
Query: 181 agtaccaactgtatacaatatttacactttaagaaaagaatgctttccataccaacgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agtaccaactgtatacaatatttacactttaagaaaagaatgctttccataccaacgtat 632

                                                                       
Query: 241 ctaacagccatcaatgacatcatgcaaagatacattccttttaaaaagggactatgtaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctaacagccatcaatgacatcatgcaaagatacattccttttaaaaagggactatgtaca 572

                                                                       
Query: 301 ttttgaagactacttcatttctttgtatgctatttggaaatttgctcccaaagttcgttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttttgaagactacttcatttctttgtatgctatttggaaatttgctcccaaagttcgttt 512

                                                                       
Query: 361 cttgatgctttatcatatataaatatagcaccacccagcttatcatgtcacatgcaccaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cttgatgctttatcatatataaatatagcaccacccagcttatcatgtcacatgcaccaa 452

                                                                       
Query: 421 ttttggatgaatgcttcttcatgtgatactattgcagagtcaattaaagctgactatttg 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 451 ttttggatgaatgcttcttcatgtgatactactgcagagtcaattaaagctgactatttg 392

                                                                       
Query: 481 cttcctctggctaatcactatgggtaggcactggcagtagatcaaaaaccacatgtgggc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cttcctctggctaatcactatgggtaggcactggcagtagatcaaaaaccacatgtgggc 332

                                                                       
Query: 541 cctgactttctaaggttgagagttcataaattagaaatgggaacaaaaaagggaaatgaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctgactttctaaggttgagagttcataaattagaaatgggaacaaaaaagggaaatgaa 272

                                                                       
Query: 601 aaagtagcagggaagttatgaactggtaaaaagaagaaaaaaaggagacaaatttggtgt 660
           ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 271 aaagtagcagggaagttatgaactggtaacaagaagaaaaaaaggagacaagtttggtgt 212

                      
Query: 661 attaatttgca 671
           |||||||||||
Sbjct: 211 attaatttgca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1069
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1059
Effective search space:   699999
Effective search space used:   699999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)