MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-235B06
Chromosome	5 (Build37)
Map Location	91,640,836 - 91,641,137
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cox18, Ankrd17, Alb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15, Cxcl1, Cxcl2, 1110019K23Rik, Epgn, Ereg, Areg
Downstream gene	Btc, 9130213B05Rik, EG665860, LOC665864, LOC100040506, Ppia-ps5_892.1, Rchy1, Thap6, Gm1045, Cdkl2, LOC100040574, G3bp2, Vdp, LOC100040605, U90926
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cox18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231430 MGI:2448532
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81702 MGI:1932101
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Alb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11657 MGI:87991
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Afp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11576 MGI:87951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Afm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:280662 MGI:2429409
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040105 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040105
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC622307 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Rassf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73246 MGI:1920496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20311 MGI:1096868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57349 MGI:1888712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56744 MGI:1888711
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1960 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330122 MGI:3037818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20309 MGI:1339941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14825 MGI:108068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20310 MGI:1340094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110019K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665563 MGI:1915871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epgn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71920 MGI:1919170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ereg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13874 MGI:107508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Areg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11839 MGI:88068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12223 MGI:99439
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130213B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231440 MGI:2443349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665860 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665860 MGI:3643840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 140 ESTs, 7 Proteins

name	LOC665864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 82 ESTs, 6 Proteins pseudo : _no_value

name	LOC100040506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ppia-ps5_892.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433914
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 5_892.1 pseudo : _no_value

name	Rchy1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68098 MGI:1915348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381650 MGI:1922436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 2 Proteins

name	Gm1045 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381651 MGI:2685891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Cdkl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53886 MGI:1858227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040574 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs

name	G3bp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Vdp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56041 MGI:1929095
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040605 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1101 ESTs, 10 Proteins

name	U90926 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57425 MGI:1930915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Cox18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348223 GeneID:231430 MGI:2448532
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) transcript_id : NM_001033310.2

name	Ankrd17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40549394 GeneID:81702 MGI:1932101
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 17 transcript_id : NM_198010.2

name	Ankrd17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40549396 GeneID:81702 MGI:1932101
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 17 transcript_id : NM_030886.2

name	Alb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803359 GeneID:11657 MGI:87991
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : albumin 1 transcript_id : NM_009654.2

name	Afp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356981 GeneID:11576 MGI:87951
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha fetoprotein transcript_id : NM_007423.3

name	Afm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347463 GeneID:280662 MGI:2429409
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : afamin transcript_id : NM_145146.2

name	LOC622307 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253998 GeneID:622307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : similar to LOC360919 protein transcript_id : XM_886735.3

name	Rassf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110431379 GeneID:73246 MGI:1920496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras association (RalGDS/AF-6) domain family 6 transcript_id : NM_028478.2

name	Cxcl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114842397 GeneID:20311 MGI:1096868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 5 transcript_id : NM_009141.2

name	Ppbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802684 GeneID:57349 MGI:1888712
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pro-platelet basic protein transcript_id : NM_023785.2

name	Cxcl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357546 GeneID:56744 MGI:1888711
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 4 transcript_id : NM_019932.2

name	Gm1960 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368523 GeneID:330122 MGI:3037818
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1960, (NCBI) transcript_id : NM_203320.2

name	Cxcl15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374148 GeneID:20309 MGI:1339941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 15 transcript_id : NM_011339.2

name	Cxcl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802720 GeneID:14825 MGI:108068
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 1 transcript_id : NM_008176.2

name	Cxcl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130527 GeneID:20310 MGI:1340094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 2 transcript_id : NM_009140.2

name	1110019K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301197 GeneID:665563 MGI:1915871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110019K23 gene transcript_id : NM_026788.1

name	Epgn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131191 GeneID:71920 MGI:1919170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial mitogen transcript_id : NM_053087.2

name	Ereg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709826 GeneID:13874 MGI:107508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epiregulin transcript_id : NM_007950.2

name	Areg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891746 GeneID:11839 MGI:88068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amphiregulin transcript_id : NM_009704.3

name	Btc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803221 GeneID:12223 MGI:99439
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : betacellulin, epidermal growth factor family member transcript_id : NM_007568.3

name	9130213B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130163 GeneID:231440 MGI:2443349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130213B05 gene transcript_id : NM_145562.2

name	EG665860 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374924 GeneID:665860 MGI:3643840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 140 ESTs, 7 Proteins product : predicted gene, EG665860 transcript_id : XM_979932.1

name	LOC100040506 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254005 GeneID:100040506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040506 transcript_id : XM_001474924.1

name	Rchy1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892747 GeneID:68098 MGI:1915348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger and CHY zinc finger domain containing 1 transcript_id : NM_026557.3

name	Thap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374926 GeneID:381650 MGI:1922436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 2 Proteins product : THAP domain containing 6 transcript_id : XM_980102.1

name	Gm1045 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374928 GeneID:381651 MGI:2685891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : gene model 1045, (NCBI) transcript_id : XM_355614.4

name	Cdkl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859824 GeneID:53886 MGI:1858227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 2 (CDC2-related kinase) transcript_id : NM_177270.3

name	Cdkl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393079 GeneID:53886 MGI:1858227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 2 (CDC2-related kinase) transcript_id : NM_016912.1

name	LOC100040574 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254007 GeneID:100040574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs product : hypothetical protein LOC100040574 transcript_id : XM_001475024.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248573 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_011816.3

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248574 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080796.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248567 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080794.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248578 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080797.1

name	G3bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248569 GeneID:23881 MGI:2442040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein (SH3 domain) binding protein 2 transcript_id : NM_001080795.1

name	Vdp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956095 GeneID:56041 MGI:1929095
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle docking protein transcript_id : NM_019490.1

name	LOC100040605 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254013 GeneID:100040605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1101 ESTs, 10 Proteins product : similar to ribosomal protein L13 transcript_id : XM_001475096.1

name	U90926 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374929 GeneID:57425 MGI:1930915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence U90926 transcript_id : XM_888097.2

name	Cox18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677488 CCDS:CCDS19411.1 GeneID:231430 MGI:2448532
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_process : GO:0051205 - protein insertion into membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : COX18 cytochrome c oxidase assembly homolog protein_id : NP_001028482.1

name	Ankrd17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40549395 GeneID:81702 MGI:1932101
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0007492 - endoderm development [Evidence TAS]; GO:0006298 - mismatch repair [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform b is encoded by transcript variant 2; ankyrin repeat domain containing protein FOE; gene trap ankyrin repeat product : ankyrin repeat domain protein 17 isoform b protein_id : NP_932127.2

name	Ankrd17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40549397 GeneID:81702 MGI:1932101
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0007492 - endoderm development [Evidence TAS]; GO:0006298 - mismatch repair [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform a is encoded by transcript variant 1; ankyrin repeat domain containing protein FOE; gene trap ankyrin repeat product : ankyrin repeat domain protein 17 isoform a protein_id : NP_112148.2

name	Alb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859506 CCDS:CCDS19412.1 GeneID:11657 MGI:87991
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005576 - extracellular region [Evidence ISS]; GO:0043234 - protein complex [Evidence ISS] GO_function : GO:0016209 - antioxidant activity [Evidence ISS]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA] [Evidence ISS]; GO:0003677 - DNA binding [Evidence ISS]; GO:0008144 - drug binding [Evidence ISS]; GO:0005504 - fatty acid binding [Evidence ISS]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0019825 - oxygen binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0030170 - pyridoxal phosphate binding [Evidence ISS]; GO:0015643 - toxin binding [Evidence ISS] GO_process : GO:0009267 - cellular response to starvation [Evidence ISS]; GO:0019836 - hemolysis of host red blood cells [Evidence ISS]; GO:0051659 - maintenance of mitochondrion localization [Evidence ISS]; GO:0043066 - negative regulation of apoptosis [Evidence ISS]; GO:0043072 - negative regulation of non-apoptotic programmed cell death [Evidence ISS]; GO:0006810 - transport [Evidence ISS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : serum albumin product : albumin 1 protein_id : NP_033784.1

name	Afp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982513 CCDS:CCDS19413.1 GeneID:11576 MGI:87951
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0004566 - beta-glucuronidase activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016151 - nickel ion binding [Evidence IEA] GO_process : GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0042448 - progesterone metabolism [Evidence IMP]; GO:0019953 - sexual reproduction [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alpha-foetoprotein product : alpha fetoprotein protein_id : NP_031449.2

name	Afm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125347464 GeneID:280662 MGI:2429409
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : alpha albumin product : afamin protein_id : NP_660128.2

name	LOC622307 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253999 GeneID:622307
definition	codon_start : 1 product : similar to LOC360919 protein protein_id : XP_891828.3

name	Rassf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110431380 GeneID:73246 MGI:1920496
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Ras association (RalGDS/AF-6) domain family 6 protein_id : NP_082754.2

name	Cxcl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114842398 CCDS:CCDS19414.1 GeneID:20311 MGI:1096868
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine B subfamily, member 5; small inducible cytokine subfamily B, member 15; granulocyte chemotactic protein-2 product : chemokine (C-X-C motif) ligand 5 protein_id : NP_033167.2

name	Ppbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963823 CCDS:CCDS19415.1 GeneID:57349 MGI:1888712
definition	codon_start : 1 note : platelet basic protein; chemokine (C-X-C motif) ligand 7 product : pro-platelet basic protein protein_id : NP_076274.1

name	Cxcl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910486 CCDS:CCDS19416.1 GeneID:56744 MGI:1888711
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0008201 - heparin binding [Evidence ISS] GO_process : GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence ISS]; GO:0030595 - leukocyte chemotaxis [Evidence ISS]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0045653 - negative regulation of megakaryocyte differentiation [Evidence ISS]; GO:0030168 - platelet activation [Evidence ISS] codon_start : 1 note : platelet factor 4 product : chemokine (C-X-C motif) ligand 4 protein_id : NP_064316.1

name	Gm1960 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42600573 CCDS:CCDS19417.1 GeneID:330122 MGI:3037818
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : dendritic cell inflammatory protein 1 product : gene model 1960 protein_id : NP_976065.1

name	Cxcl15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755436 CCDS:CCDS19418.1 GeneID:20309 MGI:1339941
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0008009 - chemokine activity [Evidence IDA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IDA]; GO:0030097 - hemopoiesis [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IDA]; GO:0030593 - neutrophil chemotaxis [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : chemokine (C-X-C motif) ligand 15 (MGD\|MGI:1339941 GB\|BC061138, evidence: BLASTN, 100%, match=954); putative; small inducible cytokine subfamily B, member 15 product : chemokine (C-X-C motif) ligand 15 protein_id : NP_035469.1

name	Cxcl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680109 GeneID:14825 MGI:108068
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : GRO1 oncogene; KC/GR)-alpha; KC/GRO-alpha product : chemokine (C-X-C motif) ligand 1 protein_id : NP_032202.1

name	Cxcl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677885 GeneID:20310 MGI:1340094
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine subfamily, member 2 product : chemokine (C-X-C motif) ligand 2 protein_id : NP_033166.1

name	1110019K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124301198 GeneID:665563 MGI:1915871
definition	codon_start : 1 product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like protein_id : NP_081064.1

name	Epgn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716373 CCDS:CCDS19419.1 GeneID:71920 MGI:1919170
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IDA] GO_process : GO:0000165 - MAPKKK cascade [Evidence IDA] codon_start : 1 product : epithelial mitogen protein_id : NP_444317.1

name	Ereg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679683 CCDS:CCDS19420.1 GeneID:13874 MGI:107508
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005154 - epidermal growth factor receptor binding [Evidence IDA] [Evidence ISS]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence ISS]; GO:0007275 - development [Evidence IEA]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA]; GO:0007143 - female meiosis [Evidence ISS]; GO:0030216 - keratinocyte differentiation [Evidence ISS]; GO:0043616 - keratinocyte proliferation [Evidence ISS]; GO:0042700 - luteinizing hormone signaling pathway [Evidence ISS]; GO:0009299 - mRNA transcription [Evidence ISS]; GO:0050680 - negative regulation of epithelial cell proliferation [Evidence ISS]; GO:0051151 - negative regulation of smooth muscle cell differentiation [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0016478 - negative regulation of translation [Evidence ISS]; GO:0001556 - oocyte maturation [Evidence ISS]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0001550 - ovarian cumulus expansion [Evidence ISS]; GO:0030728 - ovulation [Evidence ISS]; GO:0045766 - positive regulation of angiogenesis [Evidence ISS]; GO:0045740 - positive regulation of DNA replication [Evidence ISS] [Evidence IDA]; GO:0045741 - positive regulation of epidermal growth factor receptor activity [Evidence ISS]; GO:0048146 - positive regulation of fibroblast proliferation [Evidence ISS]; GO:0045089 - positive regulation of innate immune response [Evidence IMP]; GO:0045410 - positive regulation of interleukin-6 biosynthesis [Evidence IMP]; GO:0045840 - positive regulation of mitosis [Evidence ISS] [Evidence IDA]; GO:0042327 - positive regulation of phosphorylation [Evidence ISS]; GO:0045860 - positive regulation of protein kinase activity [Evidence ISS]; GO:0048661 - positive regulation of smooth muscle cell proliferation [Evidence ISS]; GO:0048160 - primary follicle stage oogenesis (sensu Mammalia) [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : epiregulin protein_id : NP_031976.1

name	Areg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753108 CCDS:CCDS19421.1 GeneID:11839 MGI:88068
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA] codon_start : 1 product : amphiregulin preproprotein protein_id : NP_033834.1

name	Btc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680812 CCDS:CCDS19422.1 GeneID:12223 MGI:99439
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : betacellulin, epidermal growth factor family member protein_id : NP_031594.1

name	9130213B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704108 GeneID:231440 MGI:2443349
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : prostatic androgen-repressed message-1 product : RIKEN cDNA 9130213B05 protein_id : NP_663537.1

name	EG665860 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374925 GeneID:665860 MGI:3643840
definition	codon_start : 1 product : hypothetical protein protein_id : XP_985026.1

name	LOC100040506 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254006 GeneID:100040506
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474974.1

name	Rchy1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386058 CCDS:CCDS19424.1 GeneID:68098 MGI:1915348
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 363 product : androgen receptor N-terminal-interacting protein protein_id : NP_080833.1

name	Thap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374927 GeneID:381650 MGI:1922436
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to THAP domain containing 6 protein_id : XP_985196.1 transl_except : (pos:92394255..92394257,aa:OTHER) transl_except : (pos:92394276..92394278,aa:OTHER) transl_except : (pos:92394309..92394311,aa:OTHER) transl_except : (pos:92395501..92395503,aa:OTHER) transl_except : (pos:92395573..92395575,aa:OTHER) transl_except : (pos:92395600,aa:OTHER) transl_except : (pos:92398567..92398568,aa:OTHER) transl_except : (pos:92398572..92398574,aa:OTHER) transl_except : (pos:92398605..92398607,aa:OTHER) transl_except : (pos:92398611..92398613,aa:OTHER) transl_except : (pos:92398728..92398730,aa:OTHER) transl_except : (pos:92398758..92398760,aa:OTHER) transl_except : (pos:92398791..92398793,aa:OTHER) transl_except : (pos:92398812..92398814,aa:OTHER)

name	Gm1045 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38080305 GeneID:381651 MGI:2685891
definition	codon_start : 1 product : similar to Chromosome 4 open reading frame 26 protein_id : XP_355614.1

name	Cdkl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859825 CCDS:CCDS19425.1 GeneID:53886 MGI:1858227
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : cyclin-dependent kinase-like 2 (CDC2-related kinase) isoform 2 protein_id : NP_796244.2

name	Cdkl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393080 CCDS:CCDS19426.1 GeneID:53886 MGI:1858227
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : cyclin-dependent kinase-like 2 (CDC2-related kinase) isoform 1 protein_id : NP_058608.1

name	LOC100040574 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254008 GeneID:100040574
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475074.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248570 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 3; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform b protein_id : NP_001074264.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248575 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 4; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform b protein_id : NP_001074265.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248568 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 2; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform a protein_id : NP_001074263.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248579 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 5; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform a protein_id : NP_001074266.1

name	G3bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982757 CCDS:CCDS19427.1 GeneID:23881 MGI:2442040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2 product : Ras-GTPase-activating protein (GAP120) SH3-domain binding protein 2 isoform a protein_id : NP_035946.2

name	Vdp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956096 GeneID:56041 MGI:1929095
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005829 - cytosol [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IDA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transcytosis associated protein p115; vesicle docking protein, 115 kDa product : vesicle docking protein protein_id : NP_062363.1

name	LOC100040605 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254014 GeneID:100040605
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475146.1

name	U90926 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82897926 GeneID:57425 MGI:1930915
definition	codon_start : 1 product : hypothetical protein LOC57425 protein_id : XP_893190.1

name	LOC100040105 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040105
definition	number : 1 pseudo : _no_value

name	LOC665864 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254000 GeneID:665864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 82 ESTs, 6 Proteins product : similar to voltage dependent anion channel 2 pseudo : _no_value transcript_id : XR_031655.1

clone name	MSMg01-501E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-290J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493D20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-356D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-415J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307A18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-235B06.T7 (MSMg01no235_b06.b1)	MSMg01-235B06.TJ (MSMg01no235_b06.g1)
ACC	AG400767	AG400768
length	718	716
length of high quality (start - end)	550 (47 - 596)	303 (77 - 379)
definition	CHROMAT_FILE: MSMg01no235_b06.b1 PHD_FILE: MSMg01no235_b06.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:52:18 2005	CHROMAT_FILE: MSMg01no235_b06.g1 PHD_FILE: MSMg01no235_b06.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:52:18 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG GAATTCATGCACATACAACGAGAATGTAAAATGCTTATTACTGACTACTT TTATGCAGACCCACAATGAAAAAGTACAGGTGAGGCAGAAAGAAAGTTGT AAAAATGTGCAGTTTAGGGTTGGAAAGATGGCTCAGAGGTTAAGAGCACC GACTGCTCTACCAGGGGTCTTGAGTTCATTTTCCAGCAACTACATGGTAG CTCACAACCATCTGTAATGGAATCTGATGCCCTCTTCTGGTGTGTCTGAA GACAGTGACAGTGTACTCACATATATAAAATAAATAGGTCTTTTTTTTTT AATGTGCAGTTTAGAAAGAAAAAGAAAACCAGAGAGCAACCAATGTTAAA AAGAAGCTGTAACTGTGAAAGAGATTAGTGTCATTAAAAGAAGCTCCTGG CTCTGAAGTGCCTTTACAGGAAAAATTCCCCGAGGGCAAGACCCCAACCA ACTGAGGCTCCAGCTAGAGAAAGGAAAGATCCTAAGGGTTGTATTTTGTT TCTGTTTTCTCTTAGAAAAGTGTTTCAGAGAGGTTCACCACCATCTTCAG TGTACAGAGCTGCAGCTTTGACTATAGCCCAAGGGATTCAGCCTTCTTCA CAAGCATCAGAAATTGGCAGCATCATTCTGGGCTTGGAGACCAGAAAGAC AATGATGTGGCTGTGATA	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXACATCTGTGTGTAGAAGGCAGCTG ATGCTGTACAGCATTTTCGGGAAACCACTCAAACATGAGTATCAGACAAG CTATGGGCATCTGACCTAGGCCTGGCCCTTGACTTTTTAAAGAAGGGTTT TAAGATCACAGCTCACAGATCTGACATCATGTCTCCAGCTATGCAGATAT GGGCAGGTTGCAAAATGTCTGTGAGCTTTCTCTTCCTTACTTGAACAATG TAGCTGGTGGTACCTACTTCTCAAAAGTGCTTTGGAAATTAAAGCTTCTA GCACATGTTAATAAATAAATGTTAGCCATTACTTATAGTAAAAAAAAGTG ACGTATTGATGGGGTTGGAAAGACGGCTCAGTGGGTGAGATGACCTACTG TGTGCATATGAAGACCAGAATCCAAATTCCCGGCATACATGTGAAGCACT CCACATTCATCTGCAACCTCAACACTGTGGACAGGGAGACAGAAGTCACT TGAGCTTTCTAGTCACCAGCAGAGCTGCAGGTTCAGTGAGAGACTCTGGA ATAGAGCAGCACCCGTGACATCTTTCTCTGGCCTCCCATATACACAGGGC ACTGAATAAACATGTGTACCTGCCATCCCCACCGAAAAAGTACTGGATTG GCTTCTTTCATATTGG
quality values	Open. Hide. 8 8 8 8 8 10 19 24 37 41 37 37 37 32 32 37 37 28 24 24 32 32 33 41 46 30 28 28 28 28 30 26 26 14 14 12 13 17 24 28 30 20 24 14 18 18 30 33 53 57 38 42 38 38 53 53 41 41 37 37 37 29 25 18 17 11 11 10 11 12 18 21 30 31 31 31 36 36 50 38 42 42 42 43 57 57 57 57 59 59 57 57 57 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 68 68 57 57 57 57 57 43 43 28 28 28 30 42 47 57 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 68 68 68 50 48 46 46 48 48 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 52 52 57 57 52 59 59 59 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 57 57 57 57 57 57 59 47 48 50 48 48 50 57 59 59 54 54 48 57 48 48 48 48 57 57 57 57 57 57 57 57 54 54 57 59 59 59 59 54 54 54 57 57 57 54 54 54 57 57 59 59 59 68 59 57 57 57 57 46 34 30 18 17 17 21 24 18 24 32 42 59 59 59 59 59 48 48 59 59 59 48 48 48 57 48 53 50 50 50 50 47 47 44 44 39 39 39 37 37 37 37 37 37 46 48 48 50 53 57 57 59 59 50 47 47 41 41 39 59 59 59 59 43 39 31 36 43 59 44 47 47 50 42 41 37 37 37 32 31 37 39 39 41 46 41 41 48 48 48 59 48 48 48 57 48 48 48 48 48 59 59 59 59 47 47 47 47 44 39 39 37 34 39 39 32 26 28 28 30 32 37 39 40 40 41 48 48 48 30 30 24 19 23 34 34 48 57 57 48 53 48 37 37 34 34 41 43 37 27 21 15 15 24 22 29 28 25 25 25 28 28 37 33 28 32 32 32 28 31 34 34 23 23 23 30 25 13 11 10 17 19 28 28 21 21 12 14 19 26 33 43 43 23 19 9 9 9 21 17 19 19 17 13 15 16 12 17 28 22 32 32 15 12 12 12 12 18 26 24 16 12 12 12 19 24 30 17 11 11 11 11 13 12 11 12 12 15 19 12 13 10 9 9 8 8 8 11 16 25 25 23 21 13 13 14 17 22 21 21 13 10 10 10 30 27 26 19 18 12 12 11 19 19 11 8 8 8 10 15 9 9 9 9 10 9 10 11 11 11 11 11 12 19 26 18 18 15 15	Open. Hide. 9 9 8 13 10 8 8 8 8 8 9 9 9 18 23 37 37 47 37 39 50 50 53 53 53 53 53 53 53 43 53 53 47 43 39 39 39 39 42 24 24 29 40 42 57 68 68 68 54 54 68 68 68 68 68 68 68 68 68 68 68 48 48 41 36 41 41 43 42 47 36 50 50 50 50 50 68 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 53 53 53 53 57 57 53 53 53 53 53 53 53 57 53 59 59 59 59 48 47 42 42 30 27 12 10 9 8 8 22 26 41 37 37 37 41 50 53 53 53 38 42 42 50 50 50 57 57 50 53 53 53 53 53 50 50 68 68 68 51 51 51 47 47 47 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 59 57 52 52 57 57 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 59 44 36 33 18 18 14 28 24 34 24 24 24 15 15 12 15 12 12 12 18 18 18 24 15 28 32 44 59 59 59 68 68 68 68 68 68 57 59 59 54 54 57 59 59 59 57 48 48 48 48 48 48 46 44 32 30 18 15 12 8 8 8 8 10 15 26 18 32 28 39 39 43 43 43 43 48 42 42 42 47 47 39 47 39 39 30 29 30 18 18 20 32 34 41 43 41 32 32 41 41 47 39 40 40 40 43 43 43 43 36 36 39 43 43 48 57 43 57 48 48 48 42 37 28 28 28 23 26 35 28 28 28 28 39 39 44 57 48 48 47 47 36 36 33 33 37 37 47 47 27 28 19 17 17 19 37 37 39 40 40 39 39 39 35 25 27 30 32 32 17 24 24 25 25 30 37 37 37 32 25 31 31 31 28 33 29 29 33 28 35 35 39 39 47 42 39 29 23 20 18 18 19 28 19 19 19 26 26 14 18 18 18 18 12 10 10 11 8 8 8 17 22 34 30 21 21 11 12 12 23 15 19 19 14 17 22 17 30 15 15 12 12 12 12 11 9 9 9 16 14 12 16 12 16 12 12 10 9 10 10 22 22 20 17 11 8 8 8 10 13 11 9 9 10 9 13 15 19 13 15 16 8 8 8 8 10 14 11 11 14 15 18 21 16 20 12 10 10 14 11 11 11 11 12 17 18 21 13 14 15 16 19 15 19 15 8 6 6 8 8 10 14 9 10 7 8 8 8 8 6 8 8 8 8 6 6 6 8 8 8 13 19 14 10 10 9 12 8 10 10 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no235_b06.g1 MSMg01no235_b06.g1 CHROMAT_FILE:
MSMg01no235_b06.g1 PHD_FILE: MSMg01no235_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:18 2005
         (303 letters)



>mm_chr5_91640781_91641482
          Length = 702

 Score =  563 bits (291), Expect = e-165
 Identities = 300/303 (99%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatctgtgtgtagaaggcagctgatgctgtacagcattttcgggaaaccactcaaacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 357 acatctgtgtgtagaaggcagctgatgctgtacagcattttcgggaaacca-tcaaacat 299

                                                                       
Query: 61  gagtatcagacaagctatgggcatctgacctaggcctggcccttgactttttaaagaagg 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gagtatcagacaggctatgggcatctgacctaggcctggcccttgactttttaaagaagg 239

                                                                       
Query: 121 gttttaagatcacagctcacagatctgacatcatgtctccagctatgcagatatgggcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 238 gttttaagatcacagctcacagatctgacatcatgtctccagctatgcagatatgagcag 179

                                                                       
Query: 181 gttgcaaaatgtctgtgagctttctcttccttacttgaacaatgtagctggtggtaccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gttgcaaaatgtctgtgagctttctcttccttacttgaacaatgtagctggtggtaccta 119

                                                                       
Query: 241 cttctcaaaagtgctttggaaattaaagcttctagcacatgttaataaataaatgttagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 cttctcaaaagtgctttggaaattaaagcttctagcacatgttaataaataaatgttagc 59

              
Query: 301 cat 303
           |||
Sbjct: 58  cat 56


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 702
Length adjustment: 9
Effective length of query: 294
Effective length of database: 693
Effective search space:   203742
Effective search space used:   203742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information