CAGAAATTGCGGCCGCTAAACGACTCCTATATCCCAAAAACCGCGGAATC
CAGGAAAACTCAAAATTATTCAACTTGCCATTTTAAAGAGCTACAGAAAT
TGGGGTCTGTCTGTCTCCCTCTCGTCTCTCTGTCGTCTCCTCCCCCCCCC
CCCCCCCCCACACCCCCCCCCCCCCCNCCCCCNCCCCCCCCCCCCCCCCC
CCCTCCTCCCCCCCCTCCCCCCCCCATCCCCTCCCACTTCCCCAACCCCC
CACCACCACCAACCCACCACCCCCCCCTAAACACCCACCCCATAACACCA
ACCCAAACACCCCACAACTTTTTTTCCCAAACCACCCCCACCACCCAAAC
CACACCCCATCAAACACCACCCCCCCCCCCCCACACCCAACAAAAATAAA
ATACCATAAAACCAAAAAAAATCCCACCACCCCCCCAAACAAAAAATAAA
AAATAACAAAAACAAAAACAACCTCACACTCCACCACCCCCCCACAACCC
AACCCAACTACACCCAACACCACCAAACCCCCCCCACCCACCCACAAAAC
CACCACCACCCCCTCATCACCCACAACCAACCCCCCACCCCCCCACCACC
ACACCAACTCCCCCCACACTCCACCACCAACCCCCCCTTCCACACCCCTA
ACACACACCCCCCAAACACCCCCCACAAATCCCACCACCCAAACCAAAAA
CACACCCCACTCCACCAACCCACCACCCCACACAACCACAACTCCACAAA
ACACCACCACAACCCCCAAAAACCCCCCCCCCACCCCTCCCTCAACCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTGAATAATGGACTATGGTAAGC
TATAATCGTTGACTCTTTTCTTGTCAAAAACAGAGTTATCAACTCAAAAC
AAGCAATAGGGAAAAAAATAAAACTCCAGCTCTTTAACTCCAGCTTCCTC
AAAATTCATTGTGAAAATATTCATTATTTTGGGGGGGTGTATATTAGTCA
ATTAGCTGTGGAAAGCATGACTGAGTAACATCAGCAAACTAATAATGCGA
ATATTTAGCATAATCCTAAAAAACAGTGACATACAGCTAAGCAGTGTACG
TGAACCGGATGTGAATATTGTTTCTGAAGTCTCTGAAGATAGGTGATTAA
AACTTTCCTCATTGGAATTCACCCCAAAACTCATAATTTGCATCTATCTG
TGTTGAAGTTACTCTGCCAATTTGAGGTATTCATTTTTGTATGTGCACAG
ACGCAATACAATTCCTATTATTCATTTCATTGCTCACATTAGCTAGATTA
TCTGAGTTTGTGTTATTTTCTAGAAATAATATATATTTTGAGTTTTATTA
ACACTTTAGCAGAAGGAAATTTTTTTTCTTTTATGAAATCATTGCTTCAG
TAATAATTTTGAATGTGAAATCTAAAATGTTTGTCCCTGGTTGAGTGCCA
GGTATTATGCTAACN

Query= MSMg01no235_b23.g1 MSMg01no235_b23.g1 CHROMAT_FILE:
MSMg01no235_b23.g1 PHD_FILE: MSMg01no235_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:22 2005
         (614 letters)



>mm_chr5_63087477_63088490
          Length = 1014

 Score = 1156 bits (598), Expect = 0.0
 Identities = 610/614 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgaataatggactatggtaagctataatcgttgactcttttcttgtcaaaaacagagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 attgaataatggactatggtaagctataatcgttgactcttttcttgtcaaaaacagagt 755

                                                                       
Query: 61  tatcaactcaaaacaagcaatagggaaaaaaataaaactccagctctttaactccagctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tatcaactcaaaacaagcaatagggaaaaaaataaaactccagctctttaactccagctt 695

                                                                       
Query: 121 cctcaaaattcattgtgaaaatattcattattttgggggggtgtatattagtcaattagc 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 694 cctcaaaattcattgtgaaaatattcattattttgggggagtgtatattagtcaattagc 635

                                                                       
Query: 181 tgtggaaagcatgactgagtaacatcagcaaactaataatgcgaatatttagcataatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgtggaaagcatgactgagtaacatcagcaaactaataatgcgaatatttagcataatcc 575

                                                                       
Query: 241 taaaaaacagtgacatacagctaagcagtgtacgtgaaccggatgtgaatattgtttctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 taaaaaacagtgacatacagctaagcagtgtacgtgaaccggatgtgaatattgtttctg 515

                                                                       
Query: 301 aagtctctgaagataggtgattaaaactttcctcattggaattcaccccaaaactcataa 360
           |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||
Sbjct: 514 aagtctctgaagataggtgattaaaactttcctcattggaattcaggtcaaaactcataa 455

                                                                       
Query: 361 tttgcatctatctgtgttgaagttactctgccaatttgaggtattcatttttgtatgtgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tttgcatctatctgtgttgaagttactctgccaatttgaggtattcatttttgtatgtgc 395

                                                                       
Query: 421 acagacgcaatacaattcctattattcatttcattgctcacattagctagattatctgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acagacgcaatacaattcctattattcatttcattgctcacattagctagattatctgag 335

                                                                       
Query: 481 tttgtgttattttctagaaataatatatattttgagttttattaacactttagcagaagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tttgtgttattttctagaaataatatatattttgagttttattaacactttagcagaagg 275

                                                                       
Query: 541 aaattttttttcttttatgaaatcattgcttcagtaataattttgaatgtgaaatctaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaattttttttcttttatgaaatcattgcttcagtaataattttgaatgtgaaatctaaa 215

                         
Query: 601 atgtttgtccctgg 614
           ||||||||||||||
Sbjct: 214 atgtttgtccctgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)