CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTTGTACAAGGCCCCTGTGAGAACTAGACAGCGATTCTTATCTCA
ATATTCAGGCAGATCTGTCCTGTTTTGTCTCTGCTGTTCCCACTCCATCA
AAGCCTATGGAAACAATTCAAGGCCTCCCCCATTTTGTTACAGATTAAAC
AAGTTAGTAAATGTCAGGCAACAGCCTCTCCTCACAGCATAACTCGCTCT
GTGCAGACTCAATTTGGAACAGGGTTACATCAAATACCACTGGATTTATT
TGGAAAGTGAACGGTGGTCTCCCTTGTTCACAGTATAGAAAATCATTTCC
AAAGTAACTCAACCTGACTTCACACTTCTAAGGGACAGAGACGCTGACTA
CATTAAACTCTGAGTGCAAAGCCCGGAGCAGCCACCTATGGCAAAGGTCA
CAGGAGCTGAAGCTGTAAACCGTCGTCAGGTTCTTCCCTTGCCAGACTCC
ATCCATCCTGAGCAGAGACTGCTGCACAGAACGCAGTCCAGTAAGAGCCA
AGAGCTGCTAGCCTCACAATAGCAGTCACCAGCACCAGTGTGAGTGTAGA
CAAGTGTCAAGGCCCACAGCTGAAGCAACAGAGGGAATGTCTCCTGTCAA
GGCCAGCGGCCCCAGAAATGGTGGAAAGTTGCCAGGTTCCATCTGTGCCC
CGGGTCCAGGAAATGACTTGAAAGCTCCACA

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTGCCGNAAATACATAGCAGTATTATTCAACGTATCTG
AAGGGTGACATCATTCAAAATGTCCTCCATCCAATGAATGGCAACCAATA
AACTATGGCACATCCTTACAATGGAATGTTTTTCAGTTCTAAAAAGGAAT
GGTGGCACACACCTTTAGCCCCAGCACTCAGGAGACAGAGGCAGGTGGAT
CTCTCTAAGTCTGAGGATAACCTGGTCTACACAGCAACTTCTAGAGCAAG
CCGTTGGGGTGATGGACAGGTTAGCAAATTATTTAAATACCAGAGAGGAT
GGTGGGGAGGGAGGGGGAGCATGACTGATCATCACCTAGAAGGAGATGTC
TGGGCTGTGTAGCCTGTTCACCCCCCCCACTGGGATGACTTGCTGGCCTG
TGTGGAAAGGAGGTTCATCTTTGAAAGCCTCAAAAACGATGACGTGGAAC
CTGTCAATGTGCCTCATTGGATAAAAAAATGTGTCTCACATTCCTGACAA
ACCTAATGCAGTCCCTTGCACATATCATGTGTTTATGGAATTTATACTAT
TCTTATAAGATGGCCTCATTATGTATAAAGTTTCTTTGCCCTTGTAAAAC
ACCAAAGGGTTTTTGAATTTTTTCCTCCTTTAATAAAAATAATAATTGTT
TTGATTAAAACCTCTTGTTCTCGTATATACTCACAATTTTCTCTTTGTAA
GAATGTCAACAATATTCTCAAATTCTTN

Query= MSMg01no235_l03.b1 MSMg01no235_l03.b1 CHROMAT_FILE:
MSMg01no235_l03.b1 PHD_FILE: MSMg01no235_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:05 2005
         (511 letters)



>mm_chr5_119129353_119130263
          Length = 911

 Score =  946 bits (489), Expect = 0.0
 Identities = 504/509 (99%), Gaps = 2/509 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttttgtacaaggcccctgtgagaactagacagcgattcttatctcaatattca 63
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ggaattcttttgtacaagg-gcctgtgagaactagacagcgattcttatctcaatattca 653

                                                                       
Query: 64  ggcagatctgtcctgttttgtctctgctgttcccactccatcaaagcctatggaaacaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ggcagatctgtcctgttttgtctctgctgttcccactccatcaaagcctatggaaacaat 593

                                                                       
Query: 124 tcaaggcc-tcccccattttgttacagattaaacaagttagtaaatgtcaggcaacagcc 182
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcaaggccttcccccattttgttacagattaaacaagttagtaaatgtcaggcaacagcc 533

                                                                       
Query: 183 tctcctcacagcataactcgctctgtgcagactcaatttggaacagggttacatcaaata 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tctcctcacagcataactcgctctgtgcagactcaatttggaacagggttacatcaaata 473

                                                                       
Query: 243 ccactggatttatttggaaagtgaacggtggtctcccttgttcacagtatagaaaatcat 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ccactggatttatttggaaagtgaacggtggtctcccttgttcacagtatagaaaatcat 413

                                                                       
Query: 303 ttccaaagtaactcaacctgacttcacacttctaagggacagagacgctgactacattaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttccaaagtaactcaacctgacttcacacttctaagggacagagacgctgactacattaa 353

                                                                       
Query: 363 actctgagtgcaaagcccggagcagccacctatggcaaaggtcacaggagctgaagctgt 422
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actctgagtgcaaagtctggagcagccacctatggcaaaggtcacaggagctgaagctgt 293

                                                                       
Query: 423 aaaccgtcgtcaggttcttcccttgccagactccatccatcctgagcagagactgctgca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaaccgtcgtcaggttcttcccttgccagactccatccatcctgagcagagactgctgca 233

                                        
Query: 483 cagaacgcagtccagtaagagccaagagc 511
           |||||||||||||||||||||||||||||
Sbjct: 232 cagaacgcagtccagtaagagccaagagc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)