Query= MSMg01no236_a16.b1 MSMg01no236_a16.b1 CHROMAT_FILE:
MSMg01no236_a16.b1 PHD_FILE: MSMg01no236_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:30 2005
(355 letters)
>mm_chr5_54331674_54332428
Length = 755
Score = 663 bits (343), Expect = 0.0
Identities = 352/355 (99%)
Strand = Plus / Minus
Query: 1 tctgccacttgagggcatagcacaaggctgacttctgccacccaggcagaaccttgatca 60
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 682 tctgccacttgaggacatagcataaggctgacttctgccacccaggcagaaccttgatca 623
Query: 61 tggactaccagcctttagttctgtgggaaataagccaccctgtttagggtgatttatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tggactaccagcctttagttctgtgggaaataagccaccctgtttagggtgatttatcag 563
Query: 121 ctctagctgacaaaaaatgtcccacctctgatttcctccatattcataggattatcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctctagctgacaaaaaatgtcccacctctgatttcctccatattcataggattatcaaca 503
Query: 181 tcaatactcatctagaaagatcatttcataattgagacagagacagagtacttacaaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcaatactcatctagaaagatcatttcataattgagacagagacagagtacttacaaggc 443
Query: 241 tcttaatttagttgccccacttccaaattattccttttagtggctgaatgtaacaaggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcttaatttagttgccccacttccaaattattccttttagtggctgaatgtaacaaggtg 383
Query: 301 cagtggtgtcaaccttccccaggttagcactgtttctagtttttgccactattac 355
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 382 cagtggtgtcaaccttctccaggttagcactgtttctagtttttgccactattac 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_a16.g1 MSMg01no236_a16.g1 CHROMAT_FILE:
MSMg01no236_a16.g1 PHD_FILE: MSMg01no236_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:30 2005
(630 letters)
>mm_chr5_54193628_54194657
Length = 1030
Score = 1073 bits (555), Expect = 0.0
Identities = 612/631 (96%), Gaps = 2/631 (0%)
Strand = Plus / Plus
Query: 1 tgtgtcaggactgtaacatagaagttctttctgagtttctagcccgctggtatgtattca 60
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 201 tgtgtcaggactgtaacatagaagttctttctgagtttctagcctgctggtctgtattca 260
Query: 61 tttcagactcaagactattgtattgtcttaattggggtttccattgctgtgaagagatgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tttcagactcaagactattgtattgtcttaattggggtttccattgctgtgaagagattc 320
Query: 121 cataaccttatacaggtgaatatttaattcttataaaggtgaatatttaatggggtctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 cataaccttatacaggtgaatatttaattcttataaaggtgaatatttaatggcgtctgg 380
Query: 181 catacagtttcagaggttcatcccattatcatcatggtgggaagcatggcattatgcagg 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catacagtttcagaggttcagcccattatcatcatggtgggaagcatggcattatgcagg 440
Query: 241 cagacttgggacgggaggactgggaagtcctacattttgatctgaaggcacacaagagaa 300
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 441 cagacttgggacgggaggactggaaagtcctacattttgatctgaaggcacccaagagaa 500
Query: 301 gactgtctcttctgcattgggtggagcttgagcactagaagccctcaaatcccacacaca 360
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 501 gactgtctcttctgcgttgggtggagcttgagcactagaagccctcaaagcccacataca 560
Query: 361 cagtgacagtcttcctccaacaaggtaccacctcatagtagtagcatttcttatgggcca 420
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgacagtctccctctaacaaggtaccacctcatagtagtagcatttcttatgggcca 620
Query: 421 agtatattcaaaccaccacaagtaccaactctcactttgatgccatcccagttgtgtgaa 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 agtatattcaaaccaccacaagtatcaactctcactttgatgccatcccagttgtgtgaa 680
Query: 481 tcaa-ttctcaaaatattcatcttctctcatccccccttcttttcattctctccctccct 539
|||| ||||||||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 681 tcaaattctcaaaatattcatcttctctca-ccccccttcttttccttttctccctccct 739
Query: 540 tcccctttctccatattcttcttcattggctcttcgtaataaggacagattcacctctct 599
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 740 tcccctttctccatattcttcttcattggctcttggtaataaggacagattcacctctct 799
Query: 600 tagcacttttctttctccattgctgggttta 630
||||||||||||||||| |||||||||||||
Sbjct: 800 tagcacttttctttctctattgctgggttta 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
