CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGA
ATCATTTCTAGAATACCAGAACTAAGCCTCTGCTCAAGTCTTTTCCCCTA
AGCAAGTGCCCAGGTAAGCCCAGAGGCTGTGAGGGTGCAGCCAACCGCAC
ACACTTCCTGACACAGCAGAAAGCTTTGACACTCTGCTCCGAGGGTTTCC
CGAACTTTAGTGCATAAGCATCATCCGAAGGGGAGGGGTAGGTAGGTAGG
GGGATTTATTAAAACATAAATTGCTCAGCCTCATATAAGGAACCTGGTTT
AGAGGGTCTTGGGTAGCGACCAAGAATCTAAATTCTAACACAGTTTGCAG
ATGATGCTGACACTACTGCTGGTCTAGGATTCATAATTTGAGATTCACTG
CAGAAAACTGGGGAGGGGATGCATCCAGGAAGTGGGGCAATTGTTTTCCG
TTTTTATGGAAATATGACATCCTCTAAATGACTATAGAGCCTAGAGCTTT
TTATATGTACAAAACAGCTGCCAAAAATCCTGAAGTATTTGCTTTGCTGT
CTGAGCAGCCGGTTGTGATTTTCCACTCAGCCACAAAGCAGGAGCACAGA
TTTTTTTTATTTTCATGAACTGGGGGATTTGCCTCATGTCTGTATTACTG
CTTTACGGGGGCGGGGGCTGGAGAGAGCCCTGTCTATGGGACTGCTGAGG
ACAGACAGGCTTGCTGCCTCTGGATAT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGTGCTACCAAGGCTAACATTTTC
TGAAACTACAGGTACTGATGATCAAACTCAGGTCCTATGCTTATGAAGCA
AACATTTACCAACTGAACCCTCTCTCCAAACCCTTTTCTTTTGCTTTTAT
AAAGAATTTTACCTGGGCATAGTGGTGTATGCCTTTAATACTAGCGTTTG
GGAGGCAGGGGCAGGCAGATCTCTGTAAATCCAAAGCCAGCCTGGTCTAT
ATATAGAGTTCCAGGACACCCAGGGTTATCTGGTGAGACCTTGTCTAAAA
TAAGTAAGTAAGTAAATATTTAAATACCCCACCCACTAAATAAATAAATA
AATAAATAGGAGGTGGCATACAGCTAGTGTTTTAATTACTGGAGAGGCTG
AGGTGGGTAGGAATCACATGATCAAGGCCATATGAGTTCAAGACCAGTCT
GGACAATTTAGTAAGGCACTTTCCAATAACAACAACAACAACAACAACAA
AGCCAAAAGAGGGCTGAAGATATAGCTGACCACGAGAGCACTTGTTGAAG
CTGCTTAAGGTCCTGGGTTCCATTCATACTACTACAGAGTTTTTTTAAAA
AATGATCTAGGCACTTGATTCACTAGCTGAGGGTTGCAAGTTGTCTTTGT
GTATAGTGATTGTAAATTGGCTGTTTATG

Query= MSMg01no236_d23.b1 MSMg01no236_d23.b1 CHROMAT_FILE:
MSMg01no236_d23.b1 PHD_FILE: MSMg01no236_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:46 2005
         (647 letters)



>mm_chr5_132965096_132966142
          Length = 1047

 Score = 1135 bits (587), Expect = 0.0
 Identities = 602/607 (99%), Gaps = 1/607 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   aatcatttctagaataccagaactaagcctctgctcaagtcttttcccctaagcaagtgc 66
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aatcatttctagaagactagaactaagcctctgctcaagtcttttcccctaagcaagtgc 266

                                                                       
Query: 67  ccaggtaagcccagaggctgtgagggtgcagccaaccgcacacacttcctgacacagcag 126
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 267 ccaggtaagcccagaggctgtgagggcgcagccaaccgcacacacttcctgacacagcag 326

                                                                       
Query: 127 aaagctttgacactctgctccgagggtttcccgaactttagtgcataagcatcatccgaa 186
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 327 aaagctttgacactctgctccgaggttttcccgaactttagtgcataagcatcatccgaa 386

                                                                       
Query: 187 ggggaggggtaggtaggtagggggatttattaaaacataaattgctcagcctcatataag 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggggaggggtaggtaggtagggggatttattaaaacataaattgctcagcctcatataag 446

                                                                       
Query: 247 gaacctggtttagagggtcttgggtagcgaccaagaatctaaattctaacacagtttgca 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaacctggtttagagggtcttgggtagcgaccaagaatctaaattctaacacagtttgca 506

                                                                       
Query: 307 gatgatgctgacactactgctggtctaggattcataatttgagattcactgcagaaaact 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gatgatgctgacactactgctggtctaggattcataatttgagattcactgcagaaaact 566

                                                                       
Query: 367 ggggaggggatgcatccaggaagtggggcaattgttttccgtttttatggaaatatgaca 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggggaggggatgcatccaggaagtggggcaattgttttccgtttttatggaaatatgaca 626

                                                                       
Query: 427 tcctctaaatgactatagagcctagagctttttatatgtacaaaacagctgccaaaaatc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tcctctaaatgactatagagcctagagctttttatatgtacaaaacagctgccaaaaatc 686

                                                                       
Query: 487 ctgaagtatttgctttgctgtctgagcagccggttgtgattttccactcagccacaaagc 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctgaagtatttgctttgctgtctgagcagccggttgtgattttccactcagccacaaagc 746

                                                                       
Query: 547 aggagcacagattttttttattttcatgaactgggggatttgcctcatgtctgtattact 606
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aggagcacagattttttt-attttcatgaactgggggatttgcctcatgtctgtattact 805

                  
Query: 607 gctttac 613
           |||||||
Sbjct: 806 gctttac 812


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)