Query= MSMg01no237_f18.b1 MSMg01no237_f18.b1 CHROMAT_FILE:
MSMg01no237_f18.b1 PHD_FILE: MSMg01no237_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:10 2005
(194 letters)
>mm_chr5_143537003_143537596
Length = 594
Score = 337 bits (174), Expect = 4e-97
Identities = 189/194 (97%)
Strand = Plus / Minus
Query: 1 ctcattctgcagaccaccgagtgtgtggttcccatggtggcaggttggcaggctccattc 60
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctcactctgcagaccacggagtgtgtggttcccatggtggcaggttggcaggctccattc 335
Query: 61 tatgtgggggttcgggcagcgctgcggtgcccatcagtgtagggtgaggggtggtgttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tatgtgggggttcgggcagcgctgcggtgcccatcagtgtagggtgaggggtggtgttcc 275
Query: 121 ttatcctcagtgtaggctgaggaagccatgtttgttgtgtctgcatcggattgcagtgtc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 274 ttatcctcagtgtaggctgaggaagccatgtttgttgtgtctgcattggatcgcagtgtc 215
Query: 181 tccctctggaaact 194
|||||||| |||||
Sbjct: 214 tccctctgaaaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no237_f18.g1 MSMg01no237_f18.g1 CHROMAT_FILE:
MSMg01no237_f18.g1 PHD_FILE: MSMg01no237_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:10 2005
(313 letters)
>mm_chr5_143120940_143121652
Length = 713
Score = 543 bits (281), Expect = e-159
Identities = 302/313 (96%), Gaps = 8/313 (2%)
Strand = Plus / Plus
Query: 5 gaattcccatggagcccatgtaagaatttgagtatcctgtgagacatattagagcaatat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccatggaacccatgtaagaatttgagtatcctgtgagacatattagagcaatat 264
Query: 65 acctttataccatcttaacacaattgattcacacttctctct----gtacctgcttataa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 acctttataccatcttaacacaattgattcacacttctctctctctgtacctgcttata- 323
Query: 121 gcaggtagctagtcaaagcaggatttaaacctagaatcctgtggagcccactttagacag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ---ggtagctagtcaaagcaggatttaaacctagaatcctgtggagcccactttagacag 380
Query: 181 aatgtgagtatcctgttaagacatgttagagcagtatatccttataccatctttctgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgtgagtatcctgttaagacatgttagagcagtatatccttataccatctttctgtta 440
Query: 241 ggctctccacctagagcagccatcttgctattccatctgtctgttcagatctctgcctgg 300
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 ggctctccgcctagagcagccatcttgctataccatctgtctgttcagatctctgcctgg 500
Query: 301 agccacagacatt 313
|||||||||||||
Sbjct: 501 agccacagacatt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
