Query= MSMg01no237_i12.b1 MSMg01no237_i12.b1 CHROMAT_FILE:
MSMg01no237_i12.b1 PHD_FILE: MSMg01no237_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:23 2005
(350 letters)
>mm_chr5_63638605_63639354
Length = 750
Score = 630 bits (326), Expect = 0.0
Identities = 344/350 (98%)
Strand = Plus / Minus
Query: 1 ttgtttgtttgtttttatggactctgttctggttcccatgcccaggttcttgctttggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttgtttgtttgtttttatggactctgttctggttcccatgcccaggttcttgctttggct 619
Query: 61 tccctcagtgtgacctagaatgacataataaactctttctttttcaagtttgttttggtc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 618 tccctcagtgtgacctagaatgacataataaactctttccttttcaagtttgttttggtc 559
Query: 121 agtgttttttgtttctttgtttgttttctcacagcaagagaaggcaaaagtaacatgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agtgttttttgtttctttgtttgttttctcacagcaagagaaggcaaaagtaacatgaaa 499
Query: 181 tatacaaagcaaatatatgaaaacctatttatttatatatggatcactatctctgttctt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 498 tatacaaagcaaatatatgaaaacctatttatttatatatggatgactatctctgttctt 439
Query: 241 tttttaattaagtaagttcttttttttaaatcaaagtcatatttcaaatgataacaacag 300
||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 438 tttttaattaaataagctctttttttaaaatcaaagtcatatttcaaatgataacaacag 379
Query: 301 cataatgtatttttctgctttaacacaggccattattctaactaaactgt 350
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 378 cataatgtatttttctgctttaacacaggccgttattctaactaaactgt 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_i12.g1 MSMg01no237_i12.g1 CHROMAT_FILE:
MSMg01no237_i12.g1 PHD_FILE: MSMg01no237_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:23 2005
(661 letters)
>mm_chr5_63579844_63580905
Length = 1062
Score = 1170 bits (605), Expect = 0.0
Identities = 640/653 (98%), Gaps = 4/653 (0%)
Strand = Plus / Plus
Query: 1 attttgttttgttttgttttgttgtttgttttttgtttttattattttttaattaggtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttgttttgttttgttttgttgtttgttttttgtttttattattttttaattaggtat 260
Query: 61 tttcttcatttacatttccaatgctatcccaaaagtcccccataccctccccccactctc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tttcttcatttacatttccaatgctatcccaaaagtcccccatactctccccccactctc 320
Query: 121 ctacccactcactcccactttttggccctggcattcccctgtagtgaggcatataaagtt 180
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacccacccactcccacttcttggccctggcattcccctgtagtgaggcatataaagtt 380
Query: 181 tgcaagaccaaggggcctctctttccactgatggccaaccaggccatcttctgttacgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tgcaagaccaaggggcctctctttccactgatggccaaccaggccatcttctgttacata 440
Query: 241 tgtagttagagacacgagctccaggaggtaatggttagttcatattgttgttccacctac 300
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtagttagagacacgagctacaggaggtaatggttagttcatattgttgttccacctat 500
Query: 301 agggctgcagatccctttagctccttgggtactttctctagctcctccattgggggcact 360
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 agggttgcagatccctttagctccttgggtactttttctagctcctccattgggggcact 560
Query: 361 gttcatagcctttgtcattatcttgtcagcactgttctcacaaattgtatttgttaccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttcatagcctttgtcattatcttgtcagcactgttctcacaaattgtatttgttaccaa 620
Query: 421 aaagcacaacaaacagaaaacaatagcaaaaagaccattgccatagttaggcatttgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagcacaacaaacagaaaacaatagcaaaaagaccattgccatagttaggcatttgctt 680
Query: 481 tcagatagtaaactatgtctgttgtttgtcacagagacttaaagacaccaaagcagcttt 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 tcagatagtaaactatgtctgttgtttgtaacagagacttaaagacaccaaagcagcttt 740
Query: 541 aggcaaccactaagttaatatgaaagcgagaaaatcacagatgaccagattctatattgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggcaaccactaagttaatatgaaagcgagaaaatcacagatgaccagattctatattgt 800
Query: 601 tccttagtttgtatttctagcactgagtactaaaaataaaaaaaaaaagaaaa 653
|||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 801 tccttagtttgtatttctagcactgagtac-aaaaa---aaaaaaaaagaaaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
